New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 551289	39 (0.970)	3 (0.080)	3/278	NT	7.3%	coding (1223/1386 nt)	cysS	cysteinyl‑tRNA synthetase
	?	CP009273	= 552240	41 (1.140)					coding (90/213 nt)	ybcJ	ribosome‑associated protein; putative RNA‑binding protein

TGCATAGGGGAACGGCGGCGTGCGTAATAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACTTTGCCATTTTCCAGA  >  CP009273/551970‑552496                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                 tGCATAGGGGAACGGCGGCGTGCGTAATAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCgcc                                                                                                                                                                                                                                                               <  1:319318‑M2/274‑4 (MQ=255)                   cgtgcgtAATAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTcc                                                                                                                                                                                                                                            >  1:134470/1‑275 (MQ=255)                                    ggCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGCCCTTCACCTGGCCTTCGGCAATCGCGAATTTCGCCTGGGCGCCGCTTTCGCTCCCGCCTCCCCTTTTccc                                                                                                                                                                                                                            >  2:595978/1‑272 (MQ=255)                                    ggCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGc                                                                                                                                                                                                                           >  1:150415/1‑275 (MQ=255)                                    ggCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTCTGCAGCGTTTGCNCGTTTCAANCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAg                                                                                                                                                                                                                            >  1:495284/1‑274 (MQ=255)                                          atgGTCGCTTCGGCAATATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATAAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTCTGCAGCGTTTGCGCGTTTNCACCGCACCTTCGACTTTCACCTGGCATTCGGCACTCGCGATTTTCGCCTGCGCGCCGCTGTCGCTACAGCCTTCCAGTCTCAGCAAATCg                                                                                                                                                                                                                     >  1:552714/1‑275 (MQ=255)                                                                                   agcGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCATAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCg                                                                                                                                                                             <  1:404700/272‑1 (MQ=255)                                                                                        ggCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGAGCCGCTTTCGCTCCAGCCTTCCAGTGTCCGCAAGTCGCACAGCTCCACGTGCGGAGGTTTTCCTAAAGAAAATGTCGCAATGt                                                                                                                                                                       >  2:23323/1‑275 (MQ=255)                                                                                             agagGGAAAATGTCTGAAAGAAGAACCGGCCTGGTGATACAGGCCGGGAAAGGGATCAGGCAATAACCTTTACGCTGTGACCTGCAAAACTCCCTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACt                                                                                                                                                                   <  2:150414/274‑1 (MQ=255)                                                                                                  gCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAACATGTCGCCATGTTACTCATcc                                                                                                                                                              >  1:267356/1‑274 (MQ=255)                                                                                                   aaagaggctgatgagagAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCt                                                                                                                                                             <  2:134469/261‑1 (MQ=255)                                                                                                     aggctCTGANAAGAGAACCGGCCTGTTGATCCAGTCCGAGAAAGCGATCAGCCAACACCCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGAACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCtgtg                                                                                                                                                          <  2:267352/271‑1 (MQ=255)                                                                                                           ggAAAAGAGACCCGGCCTGTTGAGACAGGCCGGAAAAGGGATCAGGCAACAACCTGTACGCTGTTACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCa                                                                                                                                                     <  1:271231/273‑1 (MQ=255)                                                                                                            taaaaGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCCTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTGCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATg                                                                                                                                                   <  1:358651/274‑1 (MQ=255)                                                                                                             aaaaGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATg                                                                                                                                                   <  1:23324/274‑1 (MQ=255)                                                                                                                       cGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAacg                                                                                                                                         <  1:595991/274‑1 (MQ=255)                                                                                                                        ggCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAacgca                                                                                                                                       <  2:319312/275‑1 (MQ=255)                                                                                                                         gCCTGTTGATACAGGCCGGGAAAGGGATCATGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTACGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAacgca                                                                                                                                       <  1:373774/274‑1 (MQ=255)                                                                                                                                   aCAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAAc                                                                                                                                                                                                          >  1:166577/1‑197 (MQ=255)                                                                                                                                       gCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGc                                                                                                                                                                                                      <  2:166575/197‑1 (MQ=255)                                                                                                                                          ggnAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCCCCATCCTTCCAGTTTCAGCAAGTCGCACAGCt                                                                                                                                                                                                              <  1:526396/186‑1 (MQ=255)                                                                                                                                            gAAAGGGATCAGGCAACAACCTGTACGCTGTGGCCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGGTTGCGCGTTTCAACCGCACCGTCGACTTTCACCGGGCCTTCGGCAATCGCGATTGTCgcctgcgcgccgctttgcaggaacgcttccggttcttgctccagcaggcccaat                                                                                                                                                                                                            >  1:262388‑M2/1‑132 (MQ=255)                                                                                                                                                     cAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCgcctgcgcgccgctttgcaggaacgcttccggttcttgctccagcaggcccaatacagcgga                                                                                                                                                                                                    <  1:113405‑M2/185‑63 (MQ=255)                                                                                                                                                         caacaaCCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCgcctgcgcgccgctttgcaggaacgcttccggttcttgctccagcaggcccaatacagcggaaagt                                                                                                                                                                                                >  2:113404‑M2/1‑119 (MQ=255)                                                                                                                                                          accccccTTTACCCTGTTACCTGCACAACTCCCTGTCTGACCGGCGCCGATTTTGCCGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAAcc                                                                                                     <  2:186412/270‑1 (MQ=255)                                                                                                                                                           acaacCTGTACGCTGTGACCTGCTAAACGCTCTGTCTGACCGGCGACGATTTTGCATCGTTTTCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTGCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCGTCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAGTCAGCGTGGCAACCg                                                                                                    <  1:297210/275‑1 (MQ=255)                                                                                                                                                                  gTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCgcctgcgcgccgct                                                                                                                                                                                                                                                    <  2:404286‑M2/124‑15 (MQ=255)                                                                                                                                                                  gTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCGGTGGATCATGATATTCAACGCACGCCTGGAGCGTGTTTTAAATCAGCGTGGCCACCGTCAACgg                                                                                             >  1:186414/1‑275 (MQ=255)                                                                                                                                                                      gCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCg                                                                                                                                                                                                                                                <  1:404293/124‑1 (MQ=255)                                                                                                                                                                          tgACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCACGTCGCACAGCTCAACGTGCGGATGTTTACCTAACGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcgc                                                                                     >  1:182221/1‑275 (MQ=255)                                                                                                                                                                                   aaaCTCACTGTCTTACCGGCTACGCTTTGGCATCGTTTGCCCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGTCGCTTTAGCTCCAGCCTTCCAATTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTACAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa                                                                            <  1:599379/275‑1 (MQ=255)                                                                                                                                                                                                                      tttGCGCGTTTCAACCGCACCGTCGACTTTCACCTGTCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCaa                                                                                                                                           >  1:405959/1‑177 (MQ=255)                                                                                                                                                                                                                          cgcgTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAacgca                                                                                                                                       <  2:405952/177‑1 (MQ=255)                                                                                                                                                                                                                                tCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGt                                                                                                                                                                                                                       >  1:360217/1‑91 (MQ=255)                                                                                                                                                                                                                                  agccGCTCCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCTCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCGCAACGTGCGTATGTTTACNTAAAGAAAATGGCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACacgacg                             <  1:666467/273‑1 (MQ=255)                                                                                                                                                                                                                                    ccGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGca                                                                                                                                                                                                                   <  2:360211/91‑1 (MQ=255)                                                                                                                                                                                                                                                          gCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATg                                                                                                                                                                        >  1:449327/1‑112 (MQ=255)                                                                                                                                                                                                                                                          gCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGcc                                                                                          >  2:251557/1‑190 (MQ=255)                                                                                                                                                                                                                                                             ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTACAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGANGTTTACCTNAAGAAAATGTCCGCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGTCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACTTTGCCATTTTCCAGa  <  1:495544/275‑1 (MQ=255)                                                                                                                                                                                                                                                              tCGGCAATCGCGATTTTCGCTTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACt                                                                                                                                                                   >  1:247785/1‑113 (MQ=255)                                                                                                                                                                                                                                                              tCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTAc                                                                                                                                                                    <  2:449320/112‑1 (MQ=255)                                                                                                                                                                                                                                                              tCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcg                                                                                      <  1:251560/190‑1 (MQ=255)                                                                                                                                                                                                                                                               cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAg                                                                         >  1:351225/1‑202 (MQ=255)                                                                                                                                                                                                                                                                  cAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATc                                                                                                                                                               <  2:247782/113‑1 (MQ=255)                                                                                                                                                                                                                                                                   aaTCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGt                                                                     <  2:351219/202‑1 (MQ=255)                                                                                                                                                                                                                                                                     tCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTc                                                                                                                                             >  1:362434/1‑128 (MQ=255)                                                                                                                                                                                                                                                                         gATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAacg                                                                                                                                         <  2:362427/128‑1 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                 TGCATAGGGGAACGGCGGCGTGCGTAATAACGGTTGGCATGATGGTCGCTTCGGCAAAATGTCGATGCTATCAGCATGGATGAACGGGGCGTAGAGGGCAAAAGTCTGAAAAGAGAACCGGCCTGTTGATACAGGCCGGGAAAGGGATCAGGCAACAACCTGTACGCTGTGACCTGCAAAACTCACTGTCTGACCGGCGACGATTTTGCAGCGTTTGCGCGTTTCAACCGCACCGTCGACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACTTTGCCATTTTCCAGA  >  CP009273/551970‑552496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.