| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | CP009273 | 4,175,921 | Δ18 bp | 100% | coding (644‑661/4224 nt) | rpoC → | RNA polymerase, beta prime subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 4175921 | 4175938 | 18 | 47 [0] | [0] 49 | rpoC | RNA polymerase, beta prime subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4175920 | 0 (0.000) | 44 (1.170) | 34/290 | NT | 100% | coding (643/4224 nt) | rpoC | RNA polymerase, beta prime subunit |
| ? | CP009273 | 4175939 = | 0 (0.000) | coding (662/4224 nt) | rpoC | RNA polymerase, beta prime subunit | |||||
GCGGTATGACCAACCTGGAACGTCAGCAGATCCTGACTGAAGAGCAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTCGACGCGAAGATGGGGGCGGAAGCAATCCAGGCTCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAAAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCGGTAGACGCCCTGCTGGATAACGGTCGTCG > CP009273/4175723‑4176212 | cctatgtggttatcgaaggcggtatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaagcaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGAcc > 1:707091‑M2/217‑275 (MQ=255) atcgaaggcggtatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAAACAGAGTGGATGATCCTGACCGTTCTGCCGGt > 1:442697‑M2/206‑275 (MQ=255) tcgaaggcggtatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagttgggggcggaagcaatccagcctctgctgaagagcatggatctggagcaagagtacgaacagctgcgtgaagagctgaacgaaaccaactccaaaaacacgcgtaTCAAAATGCTGGAAGctttc > 2:660037‑M2/205‑224 (MQ=255) aggcggtatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctggacgcgctggaagagttaggtgtcgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCgttcgttc < 1:660051‑M2/24‑1 (MQ=255) cggtatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCaga > 2:600464‑M2/198‑240 (MQ=255) cggtatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTAAGTCTGGTAACAAACCaga < 1:600477‑M2/43‑1 (MQ=255) tatgaccaacctggaacgtcagcagatcctgactgaagagcagtatctgtacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtcTCAAACTGCTGGAAGCGTTCGTTCAGTCTg > 1:261463‑M2/195‑224 (MQ=255) cagcagatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGa > 1:63652‑M2/176‑188 (MQ=255) agatcctgactgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGcg < 2:63651‑M2/17‑1 (MQ=255) ctggaagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCa > 1:32510‑M2/140‑164 (MQ=255) gaagagttcggtgacgaattcgacgcgaagaggggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaancaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACg < 1:672180‑M2/138‑1 (MQ=255) aagagttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCt < 2:32509‑M2/29‑1 (MQ=255) ttcggtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTa > 1:15285‑M2/131‑275 (MQ=255) cggtgacgaattcgacgcgaagatgggggcggaagcaatccaggttctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTNACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTAt > 1:543265‑M2/129‑274 (MQ=255) gtgacgaattcgacgcgaagatgggggcggaggcaatccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCAGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTAtcgt > 1:143982‑M2/127‑275 (MQ=255) gtgacgaattcgacgcgaagatgggggcggaagcaatccaggctctgctgaagagcgtggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTAtcgt > 1:294738‑M2/127‑275 (MQ=255) aagctattccggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccangcgtaTCAAACTGCTGGACGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTAGACGATCTTTATCGTCGCGTCATTAACCGTAACAACCGTCTGaa < 1:546188‑M2/178‑1 (MQ=255) tccaggctctgctgaagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACAAGAGTGGATGATCCTGCCCGTTCTGCCGNTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAAAGATCAGTATCGTCGCGTACTTACCCGTAACaaccgtctgaaccgtctg > 1:684828‑M2/91‑275 (MQ=255) aagagcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTc > 1:14224‑M2/77‑203 (MQ=255) gcatggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGCAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGAc < 2:14224‑M2/131‑1 (MQ=255) catggatctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCg > 1:596537‑M2/72‑274 (MQ=255) catggatctggagcaacagtgcgaacagatgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCATTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGNCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTaa > 1:529689‑M2/72‑237 (MQ=255) tgggatccggggcaagagggcgaccagcggcgggaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGAGGATCCTGACCGTGCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCgg < 2:294733‑M2/204‑1 (MQ=255) atctggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTc > 2:741684‑M2/67‑221 (MQ=255) ggagcaagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTa < 1:741698‑M2/159‑1 (MQ=255) aagagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCa < 2:15447‑M2/3‑1 (MQ=255) agagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGaa > 1:17420‑M2/57‑192 (MQ=255) agagtgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGACCTGGCTGCGCCGGACATCCTctttcgt > 2:673545‑M2/57‑274 (MQ=255) tgcgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGAt < 2:17420‑M2/140‑1 (MQ=255) cgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtcTCAAACTGCTGGAAGCGTTCGTTCAGTCTGCTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCCGATCTGCGCCCGCTGGTTCCGCTGGTTGGTGGTCGTTTGGCGACTTctgcc > 2:420161‑M2/51‑179 (MQ=255) cgaacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACACACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGATCCGCAGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGACACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGaaa > 1:641415‑M2/51‑275 (MQ=255) aacagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCa > 1:70173‑M2/49‑73 (MQ=255) cagctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGa < 1:420168‑M2/135‑1 (MQ=255) gctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCt < 2:70172‑M2/29‑1 (MQ=255) tgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGAc > 2:40058‑M2/43‑173 (MQ=255) cgtgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTAtc > 1:372248‑M2/41‑187 (MQ=255) tgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGCTCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGAAtgctgc > 1:131698‑M2/39‑275 (MQ=255) tgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGAc > 2:521288‑M2/39‑169 (MQ=255) tgaagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGa < 1:40059‑M2/135‑1 (MQ=255) aagagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTAtcgtcg < 2:372241‑M2/151‑1 (MQ=255) gagctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGTCGGTGGTCGTTTCGCGACTTCTGACCTGa < 1:521297‑M2/135‑1 (MQ=255) ctgaacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCTTTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGACTGCGCCGGACATCATCGTACGTAACGAAAAACGAAAGCAGCAGGAAg > 1:314191‑M2/32‑274 (MQ=255) ctgaacgaaaccaaatccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAAc > 1:553433‑M2/32‑70 (MQ=255) aacgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCNGCGTCCGCTGGGTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAg < 1:673559‑M2/243‑1 (MQ=255) acgaaaccaactccgaaaccaagcgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCaga < 2:553422‑M2/43‑1 (MQ=255) cgtaTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGNCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCGGTAGACGCCCTGCTGGATAACGgtcg > 1:619668‑M2/5‑275 (MQ=255) aTCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCNGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCCGTAGCAGACCTGCTGGATAACGGtcgtcg < 1:510926‑M2/274‑1 (MQ=255) tCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGAcc > 2:98405/1‑132 (MQ=255) tCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGACCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCa > 1:322853/1‑238 (MQ=255) | GCGGTATGACCAACCTGGAACGTCAGCAGATCCTGACTGAAGAGCAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTCGACGCGAAGATGGGGGCGGAAGCAATCCAGGCTCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAAAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCGGTAGACGCCCTGCTGGATAACGGTCGTCG > CP009273/4175723‑4176212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |