mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1798104 = | 40 (1.000) | 4 (0.110) | 3/294 | NT | 4.9% | pseudogene (330/1476 nt) | arpB | pseudogene, ankyrin repeats |
| ? | CP009273 | 1798586 = | 119 (3.130) | pseudogene (812/1476 nt) | arpB | pseudogene, ankyrin repeats | |||||
| * | ? | CP009273 | 280492 = | 78 (1.940) | 3 (0.080) | 3/302 | NT | 3.7% | coding (1581/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein |
| ? | CP009273 | 280805 = | 79 (2.020) | coding (1894/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein | |||||
| * | ? | CP009273 | = 6441 | 58 (1.450) | 3 (0.080) | 3/292 | NT | 4.9% | coding (19/777 nt) | yaaA | peroxide resistance protein, lowers intracellular iron |
| ? | CP009273 | = 6533 | 61 (1.610) | coding (1427/1431 nt) | yaaJ | putative transporter | |||||