Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	579529	579571	43	2 [1]	[1] 2	appY	global transcriptional activator; DLP12 prophage

ATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATA  >  CP009273/579557‑579626                |                                                       aTTACTGGAATAATCATTTTTAATATTGAGCGGCAATGGCACTTACAAGATATTACGGAATTGATTtata  <  1:293094/70‑1 (MQ=255)                aGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGc                >  2:76249/1‑41 (MQ=255)                |                                                       ATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATA  >  CP009273/579557‑579626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑