New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 3576788 =NA (NA)143 (1.490) 64/234 0.1 90.5% intergenic (+10/‑55) yrhA/insA pseudogene, interrupted by IS1E/IS1 repressor TnpA
?CP009273 = 4232212 15 (0.160)intergenic (‑30/+342) xylE/malG D‑xylose transporter/maltose transporter subunit

Only 100 of 143 total aligned reads displayed.

TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3576925‑3576788
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAG  <  CP009273/4232212‑4232075
                                                                                                                                                                                                                                                                                    
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                           <  1:2150270/139‑1
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                           <  1:675311/139‑1
 GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAA                                                                                                                                          >  1:2230023/1‑139
 GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAA                                                                                                                                          >  1:458131/1‑139
  ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAA                                                                                                                                         >  1:3393951/1‑139
      CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGAT                                                                                                                                      <  1:3199233/138‑1
      CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGAT                                                                                                                                      <  1:3815594/138‑1
       CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCA                                                                                                                                    >  1:3048037/1‑139
           GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:2967367/138‑1
           GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:1248646/138‑1
           GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:4809389/138‑1
           GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:1906520/138‑1
                    GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAG                                                                                                                        >  1:2801222/1‑138
                       GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAG                                                                                                                    <  1:4296121/139‑1
                        TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA                                                                                                                                           <  1:1093635/115‑1
                          ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTC                                                                                                                 <  1:4915532/139‑1
                          ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTC                                                                                                                 <  1:207173/139‑1
                                CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATG                                                                                                           >  1:5002909/1‑139
                                 ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGA                                                                                                          <  1:1723898/139‑1
                                  CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 >  1:3675213/1‑115
                                   CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAAT                                                                                                        >  1:453815/1‑139
                                   CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       <  1:1494760/124‑1
                                   CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGAT                                                                                                                                      <  1:3904160/109‑1
                                      GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     <  1:218396/139‑1
                                       TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTG                                                                                                               <  1:2665343/128‑1
                                            AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATTCACTAAATCAGTAAGGTGGCAGCATCACCAAAGATTAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTA                                                                                                <  1:1308654/138‑1
                                            AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAG                                                                                                  <  1:1120401/136‑1
                                             GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTC                                                                                                                            >  1:1322919/1‑109
                                                GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT                                                                                           <  1:3040592/139‑1
                                                 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     >  1:82286/1‑128
                                                 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:3340658/100‑1
                                                 AACAGGAGGGACAGCTGATAGAAACAAAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     <  1:1487913/128‑1
                                                  ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTC                                                                                          <  1:5103963/138‑1
                                                      GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     >  1:788308/1‑123
                                                      GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGAAAGTTGGCAGCATCACCAAAGATCAGAATGGGCTAAGGCAGGTCTGAATGAATACC                                                                                                     >  1:249554/1‑123
                                                       AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAG                                                                                       <  1:3686125/136‑1
                                                        GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:3542471/1‑103
                                                           ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:758603/1‑100
                                                           ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGACCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT                                                                                           >  1:4068820/1‑128
                                                             AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATT                                                                              >  1:4316/1‑139
                                                                TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATT                                                                              <  1:3733325/136‑1
                                                                  ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:4921925/83‑1
                                                                   TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGA                                                                         <  1:1349786/138‑1
                                                                       AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       <  1:3299896/88‑1
                                                                         CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     <  1:931589/104‑1
                                                                            AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAACTCCAGTTATATATTTTCGATTACCTTAc                                                                >  1:4638471/1‑137
                                                                            AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:2342835/1‑83
                                                                              GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTTCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     <  1:1871826/99‑1
                                                                              GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTC                                                              <  1:927901/138‑1
                                                                                CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATACATTTTCGATTACCTTAGTCG                                                             <  1:5137891/137‑1
                                                                                 ACTGGAGCACCTCAAAAACACCATCATACAATAAATCAGTAAGTTGGCAGCATCACAAAAGATCAGAATGGTCTAAGGCAGGTCTGAA                                                                                                             >  1:2720327/1‑88
                                                                                   TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT                                                                                           >  1:3513405/1‑104
                                                                                   TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACA                                                        >  1:3440139/1‑139
                                                                                    GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACAT                                                       <  1:2377141/139‑1
                                                                                        CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGTTCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT                                                                                           >  1:4451980/1‑99
                                                                                           CTCAAAAACACCATCATGCACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:1683272/58‑1
                                                                                           CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAAT                                                                                                            >  1:1189777/1‑79
                                                                                                   CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTAT                                        <  1:699189/139‑1
                                                                                                   CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTAT                                        <  1:3493035/139‑1
                                                                                                    ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       <  1:4117869/59‑1
                                                                                                    ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:815540/49‑1
                                                                                                     CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:4263744/1‑58
                                                                                                      CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGACTGAATGAATACCCAGTATAATT                                                                                           >  1:3245343/1‑85
                                                                                                        TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTG                                     >  1:875417/1‑137
                                                                                                        TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGG                                                   <  1:4346830/123‑1
                                                                                                        TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTAT                                                                                               <  1:2080606/79‑1
                                                                                                         CATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCT                                                           <  1:4022993/114‑1
                                                                                                         CATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:481110/44‑1
                                                                                                            ACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA                                                                                                                                 <  1:3455240/41‑1
                                                                                                              ACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGA                                                                                                          <  1:3792181/62‑1
                                                                                                              ACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAA                                                                                                             >  1:1537061/1‑59
                                                                                                              ACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:3397519/1‑49
                                                                                                                TAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGA                              >  1:1028112/1‑136
                                                                                                                TAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCG                                                             <  1:4942198/105‑1
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACC                          >  1:2935702/1‑138
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACC                          >  1:754073/1‑138
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACC                          >  1:2854389/1‑138
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTA                                         >  1:1766510/1‑123
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAG                                                    >  1:4184930/1‑112
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTT                                                                                     >  1:4660266/1‑79
                                                                                                                  AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC                                                                                                     >  1:2528875/1‑63
                                                                                                                   ATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCG                         >  1:1974155/1‑138
                                                                                                                   ATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:3063545/1‑44
                                                                                                                      AGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:873330/1‑41
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTA                   >  1:3791665/1‑139
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTA                   >  1:1203697/1‑139
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTA                   >  1:624977/1‑139
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTA                   >  1:423763/1‑139
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGAC                             >  1:4509187/1‑129
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTA                                                                                                >  1:1210759/1‑62
                                                                                                                        TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG                                                                                                                       >  1:2622776/1‑39
                                                                                                                          AGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATT                 >  1:279267/1‑139
                                                                                                                          AGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGG                                                   >  1:2363128/1‑105
                                                                                                                            TTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCG                                                             <  1:3028819/93‑1
                                                                                                                               GCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGG            >  1:1938535/1‑139
                                                                                                                               GCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGG            >  1:4046149/1‑139
                                                                                                                                CAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAG                                                                                                  >  1:2242627/1‑52
                                                                                                                                      CACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTT     >  1:1555911/1‑139
                                                                                                                                      CACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGG                                                   >  1:446347/1‑93
                                                                                                                                         CAAAGATCAGAATGTTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCATTTATATATTTTAGATTACCTTAGTCGCTTCATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAG  <  1:2058784/139‑1
                                                                                                                                                                                                                                                                                    
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3576925‑3576788
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAG  <  CP009273/4232212‑4232075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.