| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4034057 | 28 (0.290) | 17 (0.010) +G |
10/232 | 5.1 | 18.1% | intergenic (+61/+209) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | KX077536 | 8 = | 127 (0.040) | intergenic (–/‑1091) | –/unknown | –/BLA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 7798 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGG > KX077536/1‑146 | ggcagggcggggcgtaataagctagcgcggccgctgcagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGa > 1:3234521‑M1/130‑138 (MQ=255) gcgcggccgctgcagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATcc < 1:3403419‑M1/34‑1 (MQ=255) gcggccgctgcagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgc > 1:1221210‑M1/104‑139 (MQ=255) gcggccgctgcagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccg > 1:4258546‑M1/104‑138 (MQ=255) gcggccgctgcagcccgggggagcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgc > 1:1925909‑M1/104‑139 (MQ=255) gctgcagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCt > 1:2247820‑M1/98‑139 (MQ=255) cagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:3281026‑M1/45‑1 (MQ=255) cagcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:3655258‑M1/45‑1 (MQ=255) cagcccgagggatcccagggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:4161163‑M1/45‑1 (MQ=255) gcccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCt < 1:5029531‑M1/48‑1 (MQ=255) ccgggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGAcc > 1:849575‑M1/90‑136 (MQ=255) ccgggggatcccagggtacgcgtgctcgaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCACTAGACCTa > 1:4695095‑M1/90‑138 (MQ=255) gggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGAc < 1:4112959‑M1/46‑1 (MQ=255) gggggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACATAgg < 1:1177882‑M1/51‑1 (MQ=255) gggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGct < 1:1462596‑M1/14‑1 (MQ=255) gggatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggccgttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg > 1:4654230‑M1/86‑136 (MQ=255) gatcccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCtctc > 1:1981524‑M1/84‑100 (MQ=255) cccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACg > 1:3458672‑M1/81‑92 (MQ=255) cccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTg < 1:3191549‑M1/20‑1 (MQ=255) ccatggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGgtgatcg > 1:5123530‑M1/80‑88 (MQ=255) atggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:4741784‑M1/78‑118 (MQ=255) atggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCt > 1:712551‑M1/78‑119 (MQ=255) ggtacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg > 1:1414041‑M1/76‑126 (MQ=255) tacgcgtgctagaggcatcaactaaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCtt < 1:3605885‑M1/65‑1 (MQ=255) tacgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACg > 1:2847586‑M1/74‑85 (MQ=255) cgcgtgctagaggcatcaaataaaacgcaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGa < 1:2306202‑M1/27‑1 (MQ=255) cgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACg > 1:2592199‑M1/72‑83 (MQ=255) cgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACg < 1:531934‑M1/12‑1 (MQ=255) cgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATcc < 1:2630482‑M1/34‑1 (MQ=255) cgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:507751‑M1/45‑1 (MQ=255) cgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGAc < 1:4068378‑M1/46‑1 (MQ=255) cgcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTcc < 1:1555769‑M1/67‑1 (MQ=255) gcgtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGa < 1:753424‑M1/21‑1 (MQ=255) gtgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTc < 1:2397188‑M1/69‑1 (MQ=255) tgctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:3740016‑M1/45‑1 (MQ=255) gctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccg > 1:1692081‑M1/67‑101 (MQ=255) gctagaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTa > 1:1001263‑M1/67‑115 (MQ=255) gctacaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCtctc > 1:1366230‑M1/67‑83 (MQ=255) agaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGatata < 1:3022483‑M1/57‑1 (MQ=255) agaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACt > 1:3318237‑M1/64‑139 (MQ=255) gaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:4021112‑M1/63‑103 (MQ=255) aggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAg < 1:289321‑M1/22‑1 (MQ=255) aggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAg < 1:9013‑M1/22‑1 (MQ=255) aggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGAc < 1:127405‑M1/46‑1 (MQ=255) aggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg < 1:4498766‑M1/51‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAg < 1:3142586‑M1/22‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGa < 1:2808961‑M1/27‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:267571‑M1/45‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGAc < 1:1743102‑M1/46‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTa < 1:459581‑M1/49‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAggg < 1:109848‑M1/52‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg < 1:4550518‑M1/51‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg < 1:945216‑M1/51‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg < 1:1789847‑M1/51‑1 (MQ=255) tcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAg < 1:2072051‑M1/50‑1 (MQ=255) aaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGa < 1:4359629‑M1/27‑1 (MQ=255) aaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccg > 1:4985644‑M1/55‑89 (MQ=255) aaataaaacgaaaggctcaggcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:2933884‑M1/45‑1 (MQ=255) aacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:4930219‑M1/49‑89 (MQ=255) aacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:1316351‑M1/45‑1 (MQ=255) aaggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACg < 1:2544980‑M1/12‑1 (MQ=255) aggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAAt < 1:3551831‑M1/32‑1 (MQ=255) aggctcagtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:2763150‑M1/45‑1 (MQ=255) agtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGct > 1:3828089‑M1/37‑50 (MQ=255) agtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:2349282‑M1/45‑1 (MQ=255) gtcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACg < 1:3700260‑M1/12‑1 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGaa > 1:22057‑M1/35‑44 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGa > 1:62396‑M1/35‑43 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgc > 1:3969264‑M1/35‑70 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:1841437‑M1/35‑75 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:2976846‑M1/35‑75 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:2441719‑M1/35‑75 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGccc > 1:4403551‑M1/35‑75 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:3782037‑M1/45‑1 (MQ=255) tcgaaagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCt > 1:1057670‑M1/35‑82 (MQ=255) aagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTgcggcg > 1:2023727‑M1/31‑138 (MQ=255) aagactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGa > 1:2113733‑M1/31‑139 (MQ=255) agactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAg > 1:1139611‑M1/30‑139 (MQ=255) agactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAg > 1:798911‑M1/30‑139 (MQ=255) gactgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccg > 1:1885027‑M1/29‑63 (MQ=255) actgggcctttcgttttatctgttgttTGTCGGTGAACGCtctc > 1:3061602‑M1/28‑44 (MQ=255) actgggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCt > 1:1599422‑M1/28‑91 (MQ=255) gggcctttcgttttctctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGaa < 1:1508875‑M1/115‑1 (MQ=255) gggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAg < 1:1643401‑M1/22‑1 (MQ=255) gggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGATTAGGACAAATCCGCCGCCCTAGAc < 1:4834141‑M1/46‑1 (MQ=255) gggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACaa < 1:4790354‑M1/30‑1 (MQ=255) gggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:663976‑M1/45‑1 (MQ=255) gggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAgg < 1:3502662‑M1/51‑1 (MQ=255) gggcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGCCTGCGGCGAGCGGaa < 1:578354‑M1/115‑1 (MQ=255) gcctttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgc > 1:3352931‑M1/23‑58 (MQ=255) gcctttcgctttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGaaa > 1:4889166‑M1/23‑138 (MQ=255) ttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAg < 1:392314‑M1/22‑1 (MQ=255) ttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAg < 1:2719138‑M1/22‑1 (MQ=255) ttcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGatata < 1:3880091‑M1/57‑1 (MQ=255) tcgttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAAt < 1:2154452‑M1/32‑1 (MQ=255) ttttatctgttgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgc > 1:3098989‑M1/15‑50 (MQ=255) ttgttTGTCGTTGAACGCTCTCCTGAGTAGGACAACTCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTTCGCGCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGaa > 1:2498494‑M1/6‑132 (MQ=255) tgttTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGa < 1:4209154‑M1/45‑1 (MQ=255) gTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGaa > 1:4307397/1‑126 (MQ=255) cGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGAttt < 1:4449071/138‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGG > KX077536/1‑146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |