| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3576788 = | NA (NA) | 93 (1.330) | 50/230 | 0.2 | 88.6% | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA |
| ? | CP009273 | = 4232212 | 12 (0.170) | intergenic (‑30/+342) | xylE/malG | D‑xylose transporter/maltose transporter subunit | |||||
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3576925‑3576788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAG < CP009273/4232212‑4232075 TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA < 1:1081745/139‑1 GATGGCCGGCGGGGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACACAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTGGGCAGCATCACCA > 1:3837516/1‑138 TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAG > 1:3147654/1‑139 CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA > 1:2679114/1‑139 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:1028093/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:2529462/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:2160089/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:2804531/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:2867376/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:3535422/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:4271733/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:4314915/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:490811/138‑1 GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:497224/138‑1 CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAAAACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCAAAGATCAGAATGG > 1:1632731/1‑137 GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG < 1:1157273/139‑1 GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG < 1:761154/139‑1 TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGG > 1:2203701/1‑138 TACGCACCACCCCGACAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGG > 1:4334980/1‑138 ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTC < 1:2588413/139‑1 ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGA < 1:2349462/139‑1 ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGA < 1:814151/139‑1 ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGA < 1:3225793/139‑1 CCCCGTCAGTAGCTGAACAGGATGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAA > 1:506344/1‑139 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATA < 1:506520/139‑1 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATA < 1:3641227/139‑1 CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATA > 1:1545183/1‑138 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGCATGAATACC < 1:811964/139‑1 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC < 1:259510/139‑1 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC < 1:975776/139‑1 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCA > 1:1054041/1‑139 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC < 1:1041342/134‑1 AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC < 1:4053276/133‑1 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCATGTCTGAATGAATACCCAGTATAAT < 1:1657338/139‑1 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAAT < 1:3715962/139‑1 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTG < 1:2970458/118‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT > 1:3213109/1‑134 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT > 1:1883177/1‑133 GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG < 1:3323641/103‑1 GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:2028725/92‑1 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG < 1:109696/101‑1 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATA > 1:1012853/1‑139 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC > 1:798336/1‑118 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAA > 1:1152075/1‑103 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCA < 1:2023668/73‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG > 1:4198493/1‑92 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATT > 1:875064/1‑139 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAA > 1:2282849/1‑101 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACC < 1:2997607/139‑1 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA > 1:4193447/1‑73 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGAT > 1:422081/1‑68 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTG < 1:331350/89‑1 CACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCT < 1:3803368/139‑1 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCG < 1:2958460/137‑1 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCG < 1:2165467/137‑1 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCT > 1:3346510/1‑138 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCT > 1:2963696/1‑138 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCT > 1:3720015/1‑138 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTA > 1:2059216/1‑139 gccCCTCCAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATTAATACCCAGTATAATTCCAGTTATATATTTTCCATTACCTTAGTCGCTACATTA < 1:1927515/135‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC > 1:2504182/1‑89 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGG < 1:2545958/138‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTG > 1:1914169/1‑139 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGG > 1:2024482/1‑139 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGG > 1:2634962/1‑139 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTT < 1:30393/139‑1 CACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTAT < 1:791559/139‑1 CCATCATACCCTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATGTATTTTCGATTACCTTAGTCGCTTCATTAGGTGGTTTATTATTT < 1:3606986/139‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTT > 1:1087569/1‑139 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCG < 1:3852109/115‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:4208343/47‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC < 1:2402822/73‑1 ACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACC < 1:932294/67‑1 ACTAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAA < 1:2082059/39‑1 TAAATCATTATGTTGGCAGCTACACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCAGGTATAATTCCAGTTATATTTTTTCGTTTACCTTAGTCGTTACATTAGGTGGTTTATTATTGGGCTACGACAC < 1:3047094/139‑1 TAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGG > 1:1681622/1‑115 TAAATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG > 1:2038590/1‑47 AATCAGTAAGTTGGCAGCATCCCCCAAGATCAGAATGGTCTAAGGCAGGTCTGAATGA < 1:837618/58‑1 AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCGGTATAATT > 1:229830/1‑73 AATCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACC > 1:457781/1‑138 TCAGTAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCATTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTCCCTTCGGTGGTT < 1:4342683/116‑1 TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTA > 1:2770937/1‑139 TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATT > 1:3104229/1‑67 TAAGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGG > 1:4251742/1‑39 AGTTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATT > 1:1820457/1‑139 AGTTGGCAACATCACAAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTGGGTGGTTTATTATTTGGCTACGACACCGCCGTTATT < 1:4194260/139‑1 TTGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTA > 1:3009684/1‑58 gGGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATCCCCATTATAATTCAAGTTATATATTTTCAATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACCCCGCCGTTATTTC < 1:4228926/137‑1 GGCAGCATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGG > 1:2173197/1‑116 ATCACCAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATCCCCAGTATAATTCCATTTATATATTTTCGATTCCCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTG < 1:2630427/139‑1 CAAAGATCAGAATGTTCTAGGGCAGGTCTGAATGAATTCCCAGTTTATTTCCAGTTATATATTTTCGATTCCCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTAC < 1:964824/132‑1 CAAAGATCAGAATGGTCTAAGGCAGTTCGGAATGAATCCCAAGTATAATTCCATTTATATATTTTCGATTCCCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAG < 1:1174998/139‑1 CAAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATCCCCAGTATAATTCCATTTATATATTTTCGATTCCCTTAGTCGCTACATTAGGTGTTTTTTTATTTGGCTCCGACACCGCCGTTATTTCCGGTACTGTTGAG < 1:2678938/139‑1 TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3576925‑3576788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGATCAGAATGGTCTAAGGCAGGTCTGAATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAG < CP009273/4232212‑4232075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |