New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 20563	NA (NA)	971 (0.050)	162/230	0.0	25.3%	noncoding (1/768 nt)	IS1	repeat region
	?	Exported	899 =	2873 (0.070)					intergenic (‑107/‑112)	aadA/fdh	aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag

TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATG  >  CP009273/20426‑20700                                                                                                                                          |                                                                                                                                          tgctGTTCGGCGGTGCCTTTGCCGTTACGCCCCACCCCGTCAGTAGCTGAACCGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc                                                                                                                                           <  1:1198717/135‑1 (MQ=1)   aTGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCaccta                                                                                                                                         >  1:2221509/1‑138 (MQ=11)     gTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacctacct                                                                                                                                      <  1:474558/139‑1 (MQ=33)       ccGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCa                                                                                                                                    <  1:3738090/139‑1 (MQ=34)        cggcggTGCTTTTGACGGTACGCACCACCACGTAAGTAGCTGAAGAGGAGGGACAGCTGATAGAAACAGAAGCCAAGGGAGTACCTCAAAAAGACGATAATACACTAAAGCAGTAAAATGGCAGCATCACCTACCTCaa                                                                                                                                   >  1:3012476/1‑139 (MQ=11)         ggcggTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt                                                                                                                                  <  1:1682370/139‑1 (MQ=37)              tGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATgtgt                                                                                                                              <  1:3262878/138‑1 (MQ=40)               gCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAtgt                                                                                                                                >  1:425282/1‑135 (MQ=38)               gCTTTTGCCGTAACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCGCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCACCATCCCCTACCTCATTGTGTa                                                                                                                             <  1:3815221/138‑1 (MQ=11)                   ttGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATcaca                                                                                                                        <  1:2184259/139‑1 (MQ=255)                    tGCCTTTACGCACCACCCCGTCAGTAGCTGAGCAGGAGCGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTACCTCAGTAACTTGGCAGCATCTCCTACCTCAATGTGTATCACaa                                                                                                                       <  1:840421/139‑1 (MQ=14)                    tGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACaa                                                                                                                       <  1:661161/139‑1 (MQ=255)                     gCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAat                                                                                                                      <  1:4210870/139‑1 (MQ=255)                            cGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt                                                                                                                                  <  1:2775077/120‑1 (MQ=38)                               accaccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATAtt                                                                                                             <  1:756891/138‑1 (MQ=255)                                 caccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCa                                                                                                                                    <  1:3266437/113‑1 (MQ=35)                                   ccccGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt                                                                                                                                  >  1:1402687/1‑113 (MQ=38)                                     ccGTCAGTAGCTGAACAGGAGGGACAGCTTATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTtgtg                                                                                                      <  1:2753623/139‑1 (MQ=255)                                      cGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATcaca                                                                                                                        >  1:602639/1‑120 (MQ=255)                                       gTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTggg                                                                                                    <  1:1976587/139‑1 (MQ=255)                                           gTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATca                                                                                                                          >  1:1094748/1‑113 (MQ=255)                                                tGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTg                                                                                            <  1:276193/138‑1 (MQ=255)                                                   aCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGgaga                                                                                        <  1:48245/139‑1 (MQ=255)                                                     aggaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTggggg                                                                                                  <  1:3228777/127‑1 (MQ=255)                                                       gaggGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGa                                                                                    >  1:3879737/1‑139 (MQ=255)                                                           gACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTgggg                                                                                                   <  1:1004781/120‑1 (MQ=255)                                                              aGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAtg                                                                                                                                 >  1:3192734/1‑87 (MQ=255)                                                               gCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGgaga                                                                                        >  1:1057025/1‑127 (MQ=255)                                                                 tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt                                                                                                                                  >  1:1589281/1‑83 (MQ=40)                                                                 tGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATAtt                                                                           <  1:3496850/138‑1 (MQ=255)                                                                   aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCaccta                                                                                                                                         <  1:2483704/74‑1 (MQ=31)                                                                   aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCa                                                                                                                                    <  1:2058501/79‑1 (MQ=39)                                                                   aTAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCtt                                                                        >  1:1782885/1‑139 (MQ=255)                                                                     aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGgag                                                                                         >  1:3176611/1‑120 (MQ=255)                                                                     aGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGt                                                                      >  1:2277388/1‑139 (MQ=255)                                                                        aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGgaga                                                                                        <  1:2410591/118‑1 (MQ=255)                                                                        aaCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGtt                                                                     <  1:3356802/137‑1 (MQ=255)                                                                             aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAtgtg                                                                                                                               >  1:310832/1‑74 (MQ=255)                                                                             aaGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATca                                                                                                                          >  1:4228210/1‑79 (MQ=255)                                                                             aaGCCACTGGAGCACCTCAAAAACACCATCATAAACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATg                                                              >  1:555145/1‑139 (MQ=255)                                                                                  aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAATTTGGCAGCATCACCTACCTCAATGTGTATCACaa                                                                                                                       <  1:3259658/77‑1 (MQ=255)                                                                                  aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt                                                                                                                                  >  1:2322771/1‑66 (MQ=255)                                                                                  aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACaa                                                                                                                       <  1:757990/77‑1 (MQ=255)                                                                                  aCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGat                                                                              >  1:237619/1‑118 (MQ=255)                                                                                    tGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGgaga                                                                                        <  1:3987296/106‑1 (MQ=255)                                                                                        gCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGa                                                    <  1:3953168/138‑1 (MQ=255)                                                                                         cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATg                                                  >  1:1238771/1‑139 (MQ=255)                                                                                           ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacctacct                                                                                                                                      >  1:2304013/1‑53 (MQ=38)                                                                                            cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATAtt                                                                                                             >  1:2930168/1‑77 (MQ=255)                                                                                            cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATAtt                                                                                                             >  1:1087952/1‑77 (MQ=255)                                                                                            cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTg                                                                                     <  1:3086912/101‑1 (MQ=255)                                                                                              cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGat                                                                              >  1:1817054/1‑106 (MQ=255)                                                                                               aaaaaCACCATCATACCCTAAATCAGTATGTTGGCAGCATCACCTACCTCACTGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTCGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTa                                            <  1:3315263/139‑1 (MQ=255)                                                                                               aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTAt                                                                                                                            <  1:2281170/59‑1 (MQ=255)                                                                                                      ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATAtt                                                                           >  1:914945/1‑101 (MQ=255)                                                                                                      ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCt                                     >  1:3026018/1‑139 (MQ=255)                                                                                                         tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCa                                                                                                                                    <  1:2133766/41‑1 (MQ=255)                                                                                                         tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATcc                                                                                                                  >  1:108012/1‑59 (MQ=255)                                                                                                         tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGa                                                    <  1:1971935/121‑1 (MQ=255)                                                                                                         tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTaa                                  >  1:1675848/1‑139 (MQ=255)                                                                                                         tcatACACTAAATCAGTAAGTTGGCAGCATCACCAACCTCAATGGGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTaa                                  >  1:3313710/1‑139 (MQ=255)                                                                                                           atACACTAAATCAGTAAGCTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGACTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAg                                 >  1:2227716/1‑138 (MQ=255)                                                                                                             acacTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTg                                                                                     <  1:1991498/84‑1 (MQ=255)                                                                                                               acTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGt                                                                                  <  1:1926745/85‑1 (MQ=255)                                                                                                               acTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCg                                                     <  1:179112/114‑1 (MQ=255)                                                                                                               acTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACg                            <  1:2688655/139‑1 (MQ=255)                                                                                                                 tAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGaa                          <  1:1142105/139‑1 (MQ=255)                                                                                                                   aaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATca                                                                                                                          >  1:4303350/1‑41 (MQ=255)                                                                                                                   aaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACg                                          >  1:4141799/1‑121 (MQ=255)                                                                                                                   aaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga                        >  1:1647216/1‑139 (MQ=255)                                                                                                                   aaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAaga                        >  1:2608038/1‑139 (MQ=255)                                                                                                                    aTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAagag                       >  1:1486907/1‑139 (MQ=255)                                                                                                                     tCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACaa                                                                                                                       <  1:781097/42‑1 (MQ=255)                                                                                                                     tCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt                      <  1:2727678/139‑1 (MQ=255)                                                                                                                     tCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt                      <  1:840684/139‑1 (MQ=255)                                                                                                                       aGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATAtt                                                                           >  1:4161321/1‑84 (MQ=255)                                                                                                                       aGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt                      <  1:1630540/137‑1 (MQ=255)                                                                                                                         tAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCtt                                                                        >  1:4096711/1‑85 (MQ=255)                                                                                                                         tAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTAc                                           >  1:2352171/1‑114 (MQ=255)                                                                                                                         tAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAg                  >  1:1586072/1‑139 (MQ=255)                                                                                                                         tAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAg                  >  1:3191800/1‑139 (MQ=255)                                                                                                                          aaGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGa                 <  1:244657/139‑1 (MQ=255)                                                                                                                           aGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGAt                >  1:802205/1‑139 (MQ=255)                                                                                                                             ttGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAag                         <  1:3905436/128‑1 (MQ=255)                                                                                                                               ggCAGCATCACCTACCTCAATGTGTATCACAATATCCATAtt                                                                                                             >  1:2953250/1‑42 (MQ=255)                                                                                                                                 cagcaTCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTa            >  1:3801180/1‑137 (MQ=255)                                                                                                                                  agcaTCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGa                                                    <  1:814310/96‑1 (MQ=255)                                                                                                                                   gcaTCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAAc        >  1:3799487/1‑139 (MQ=255)                                                                                                                                       cACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATa               >  1:1735068/1‑128 (MQ=255)                                                                                                                                       cACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCa    >  1:86088/1‑139 (MQ=255)                                                                                                                                         cctacctCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGa                                                                 <  1:1336697/76‑1 (MQ=255)                                                                                                                                         cctacctCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGt                      <  1:1017785/119‑1 (MQ=255)                                                                                                                                         cctacctCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATg  <  1:3410164/139‑1 (MQ=255)                                                                                                                                          |                                                                                                                                          TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATG  >  CP009273/20426‑20700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.