Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | CP009273 | 2,400,028 | Δ9 bp | coding (85‑93/939 nt) | lrhA ← | transcriptional repressor of flagellar, motility and chemotaxis genes |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | CP009273 | 2400028 | 2400036 | 9 | 75 [0] | [0] 75 | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 2400027 | 0 (0.000) | 73 (1.560) | 45/218 | 0.1 | 100% | coding (94/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
? | CP009273 | 2400037 = | 0 (0.000) | coding (84/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
AACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAG > CP009273/2399892‑2400151 | aaCCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaa < 1:498303‑M1/138‑3 (MQ=255) aCCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaa > 1:226940‑M1/1‑135 (MQ=255) aCCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaa > 1:564502‑M1/1‑135 (MQ=255) gaagTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagggt > 1:2559785‑M1/1‑130 (MQ=255) agTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttc < 1:1411655‑M1/138‑11 (MQ=255) tGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcaga < 1:700177‑M1/138‑14 (MQ=255) cATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaac < 1:1861101‑M1/139‑22 (MQ=255) cATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaac < 1:2615026‑M1/139‑22 (MQ=255) cATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaa < 1:1704062‑M1/138‑21 (MQ=255) cATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaa < 1:1708931‑M1/138‑21 (MQ=255) tGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaaca > 1:375089‑M1/1‑116 (MQ=255) tGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaaca > 1:2482791‑M1/1‑116 (MQ=255) tGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaaca > 1:375116‑M1/1‑116 (MQ=255) gTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagc < 1:520738‑M1/139‑25 (MQ=255) tCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaa < 1:1136509‑M1/139‑27 (MQ=255) cAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagc < 1:1261393‑M1/136‑25 (MQ=255) ttAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaa > 1:436835‑M1/1‑109 (MQ=255) aCAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgt < 1:422144‑M1/139‑34 (MQ=255) aGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgt > 1:575931‑M1/1‑104 (MQ=255) aGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgt > 1:445864‑M1/1‑104 (MQ=255) tttGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGATGACTTACGGCGGACTGAGTACGACACACAGCGGCAGAaaaagggttcagatcggcaacagcaacaaatgtt > 1:2684464‑M1/1‑102 (MQ=255) tgttgCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctca > 1:1869471‑M1/1‑100 (MQ=255) tgttgCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctca > 1:1968296‑M1/1‑100 (MQ=255) tgttgCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgtt < 1:601305‑M1/109‑10 (MQ=255) gTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggca > 1:2025419‑M1/1‑90 (MQ=255) gACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGGCACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtc < 1:1799440‑M1/139‑52 (MQ=255) gACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtc > 1:1062503‑M1/1‑88 (MQ=255) gACGAGCGAACAGTTCGTTCCCAACGAGTTGTTCCAGACGCTGCATGTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtc < 1:1799413‑M1/139‑52 (MQ=255) cGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcg < 1:544146‑M1/138‑53 (MQ=255) cGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcg < 1:1365792‑M1/138‑53 (MQ=255) cGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggtt > 1:493301‑M1/1‑82 (MQ=255) gAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggt < 1:2388562‑M1/137‑57 (MQ=255) ttCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatc > 1:567747‑M1/1‑75 (MQ=255) ttCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcg < 1:2765926‑M1/127‑53 (MQ=255) cTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcgg < 1:1059383‑M1/139‑67 (MQ=255) tttCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcgga < 1:1988655‑M1/139‑68 (MQ=255) tCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaac < 1:1054214‑M1/91‑22 (MQ=255) ccAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgat < 1:616499‑M1/139‑72 (MQ=255) ccAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaac < 1:2181133‑M1/89‑22 (MQ=255) ccAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttc < 1:63016‑M1/78‑11 (MQ=255) aCGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgattt > 1:2051629‑M1/1‑65 (MQ=255) aCGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaatta > 1:1342991‑M1/1‑65 (MQ=255) gAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgca < 1:627552‑M1/139‑77 (MQ=255) gAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgca < 1:1571772‑M1/139‑77 (MQ=255) gttgttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcac < 1:621942‑M1/138‑78 (MQ=255) gttgttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcac < 1:312254‑M1/138‑78 (MQ=255) gttgttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcac < 1:1870126‑M1/138‑78 (MQ=255) ttgttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaat > 1:2477634‑M1/1‑60 (MQ=255) gttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaat > 1:757219‑M1/1‑58 (MQ=255) gttCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaa > 1:1487647‑M1/1‑58 (MQ=255) tCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatca < 1:445207‑M1/139‑84 (MQ=255) tCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatca < 1:2433992‑M1/139‑84 (MQ=255) ccAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcat < 1:1991896‑M1/139‑85 (MQ=255) ccAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttaagatcggcaacagcaacaaatgttctcag < 1:968097‑M1/94‑40 (MQ=255) gCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgca < 1:218197‑M1/125‑77 (MQ=255) tGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatc > 1:358153‑M1/1‑47 (MQ=255) tGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatc > 1:1939898‑M1/1‑47 (MQ=255) tGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatc > 1:1527501‑M1/1‑47 (MQ=255) cATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttaagatcggcaacagcaacaaatgttctcagcagatcgagg > 1:2391650‑M1/1‑45 (MQ=255) aTTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcact < 1:569435‑M1/139‑96 (MQ=255) cTGACTTACGGCGGACTGATTACGACACACAGCGGCAGCaaaagggttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatat > 1:1642654‑M1/1‑39 (MQ=255) tGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcacttactg < 1:1782441‑M1/138‑101 (MQ=255) gACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcacttactggc < 1:1651380‑M1/139‑103 (MQ=255) gACTTACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcacttactggc < 1:102912‑M1/139‑103 (MQ=255) ttACGGCGGACTGAGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcacttactggcggc < 1:2000063‑M1/139‑106 (MQ=255) cggACTGAGTACGACACACAGCGGCAGCaaaagtgtgcagatcggcaaccgcaacaaatgttctcagcagatcgaggtcgagggtaattagcggacgatttgcacttatcatatattatcacttactggcggctcata < 1:19910‑M1/138‑111 (MQ=255) aGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcac < 1:2151749‑M1/98‑78 (MQ=255) aGTACGACACACAGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtc < 1:1067965‑M1/72‑52 (MQ=255) cacacaGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcacttactg < 1:1695573‑M1/114‑101 (MQ=255) cacacaGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcactta < 1:319616‑M1/94‑81 (MQ=255) cacacaGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggataattatcggacgatttgcacttatcatatattatcacttactggcggctcatactgagctggttaat > 1:1271612‑M1/1‑14 (MQ=255) acaGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatata > 1:727774‑M1/1‑11 (MQ=255) acaGCGGCAGCaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaatt > 1:2491362‑M1/1‑11 (MQ=255) cagcaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatattatcacttactggcggctcata > 1:271190‑M1/1‑4 (MQ=255) cagcaaaagtgttcagatcggcaacagcaacaaatgttctcagcagatcgaggtcgaggttaattatcggacgatttgcacttatcatatatta > 1:1743954‑M1/1‑4 (MQ=255) | AACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAG > CP009273/2399892‑2400151 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |