| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1 = | 0 (0.000) | 11547 (1.200) | 122/134 | 0.2 | 100% | coding (792/792 nt) | aadA | aminoglycoside adenylyltransferase (Murphy, 1985) |
| ? | Exported | = 3344 | NA (NA) | intergenic (+1110/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
Only 100 of 11547 total aligned reads displayed.
CGCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/67‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCATCTGGATT < Exported/3344‑3278 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATG < 1:2387264/68‑1 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATG < 1:2781279/68‑1 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATG < 1:4442773/68‑1 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATG < 1:429623/68‑1 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATG < 1:1495195/68‑1 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATG < 1:1377440/68‑1 GCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGACATCACCAAGGTAGTCGGCAAATAATG < 1:2297641/68‑1 GTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGA < 1:1986184/68‑1 TGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGC > 1:1336016/1‑68 TGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGC > 1:2250737/1‑68 TGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGC > 1:1088314/1‑68 TGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGC > 1:1531230/1‑68 TGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGC > 1:4208623/1‑68 TGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGC > 1:4168111/1‑68 AAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTgg > 1:791265/1‑66 AAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCG < 1:1000015/68‑1 AAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCG < 1:2916841/68‑1 AGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGC < 1:2161212/68‑1 tAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCT < 1:1130179/67‑1 GAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCT > 1:4046825/1‑68 GAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCT < 1:665116/68‑1 GAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCT < 1:4526745/68‑1 AATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTT < 1:2825228/68‑1 TTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGA < 1:2552097/68‑1 GTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACT < 1:321113/68‑1 GTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACT < 1:1049566/68‑1 GTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACT < 1:1606879/68‑1 TCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTC > 1:2509301/1‑68 TCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTC > 1:1290745/1‑68 TCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTC > 1:2344456/1‑68 caACTACGTGTTAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:748763/66‑1 CCACTCCGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:3998240/68‑1 CCACTCCGGGAAAGGCGATATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTTGACTCC < 1:3697848/68‑1 CCACTACGTGAATGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC > 1:1735922/1‑68 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:1859994/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC > 1:3390280/1‑68 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:3477004/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:3739112/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:3821492/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:3047980/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC > 1:4565228/1‑68 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:1162521/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:2644802/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:2030898/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:529154/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:4648106/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:4689608/68‑1 CCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCC < 1:2116555/68‑1 ACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTG > 1:3002783/1‑68 ACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTG > 1:921896/1‑68 CTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGT < 1:4487979/68‑1 CTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGT < 1:3953738/68‑1 TACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTT < 1:1940892/68‑1 TACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTT > 1:3780181/1‑68 TACGTGAAAGGCGAGATCACCAAGGTAGTCGGAAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTT < 1:4088932/68‑1 ACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTG > 1:1647796/1‑68 ACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTG < 1:3337867/68‑1 CGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGA < 1:3656018/68‑1 AAAGGCGAGATCAGCGAGGTGGTCGGCAAATAATGTCTAACGAGCGCGCTTGGACTCCTGTAGATAGA > 1:3433329/1‑68 AAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGA > 1:3298288/1‑68 AAAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGA > 1:1697160/1‑68 atGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCACGCTTGGACTCCTGTTGATAGAT < 1:3087793/66‑1 AAGGCGAGATCACGAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:4248422/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:1418412/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:1248249/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:3251979/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:486012/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:568764/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:4600517/68‑1 AAGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:2595603/68‑1 AAGGCCAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAT < 1:953472/68‑1 AGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATATATa > 1:3124081/1‑67 AGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGAct > 1:3162756/1‑66 AGGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATC > 1:3913718/1‑68 GGCGAGATCACCAAGGTAGTCGGCAAATAATTTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATac > 1:617952/1‑66 GGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCC > 1:434223/1‑68 GGCGAGATCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCC > 1:2425783/1‑68 GGCGAGATCACCAAGGTAGTCGGCAAATAATGACTAACGAGCTCGCTTGGACTCCTGTTGATAGATCC > 1:4128785/1‑68 GCGAGATCACCAAGGTAGGCGGCAAATAAAGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCA < 1:3521918/68‑1 TCACCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATG > 1:1899259/1‑68 CCAAGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACC < 1:1779904/68‑1 AAGGTAGGCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTC < 1:2734678/68‑1 AGGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCA < 1:3613716/68‑1 GGTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAG > 1:1824009/1‑68 GGTAGTCGGCAAATAATGGCTAACGAGCTCGCTTGGACAGCTGTTGATAGATCCAGTAATGACCTCAG > 1:835416/1‑68 GTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGA > 1:1455962/1‑68 GTAGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGA > 1:702663/1‑68 AGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAAC > 1:2687182/1‑68 AGTCGGCAAATAATGTCTAACGAGCTCGCTTGGACACCTGTTGATAGATCCAGTAATGACCTCAGAAC > 1:1210656/1‑68 AGTCGGCAAATAATGTCTAACGAGCTCGCTCGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAAC > 1:2209313/1‑68 GTCGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACT < 1:287401/68‑1 CGGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTTTTGATAGATCCAGTAATGACCTCAGAACTCC < 1:3570956/68‑1 CGGCAAATAATGTCTAACGAGCTCGCTTGGACTACTGTTGATAGATCCAGTAATGACCTCAGAACTCC > 1:2075034/1‑68 GGCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCA > 1:438872/1‑68 GCAAATAATTTCTAACGATCTCGCTGGTAGTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCAT < 1:3868416/68‑1 GCAAATAATGTCTAACGAGCTCGCTTGGGCTCCTGTTGATAGGTCCAGTAATGACCTCAGAAATCCAT > 1:878035/1‑68 GCAAATAATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCAT < 1:1568276/68‑1 ATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCATCTGGATT > 1:4731571/1‑68 ATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCATCTGGATT > 1:2472265/1‑68 ATGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCATCTGGATT > 1:2959502/1‑68 CGCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/67‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCTAACGAGCTCGCTTGGACTCCTGTTGATAGATCCAGTAATGACCTCAGAACTCCATCTGGATT < Exported/3344‑3278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |