New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 1 =0 (0.000)11547 (1.200) 122/134 0.2 100% coding (792/792 nt) aadA aminoglycoside adenylyltransferase (Murphy, 1985)
?Exported = 3344 NA (NA)intergenic (+1110/–) fdh/– formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/–

AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACA‑‑‑  >  Exported/3277‑3344
                                                                   |   
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     >  1:1178716/1‑68 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:1187609/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:1388441/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:4006907/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:3307917/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:295970/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:1891606/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:1949749/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:2399264/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:1065649/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:2273460/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:2211480/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGCAGTCCAAGCGAGCTCGTTAGACa     <  1:4112167/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGTCATTACTGGATCAATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:2135277/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGGCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:1864396/68‑1 (MQ=255)
aaaTCCAGATGGAGTTCTGAGGGCATTACTGGATCTATCAACAGCAGTCCAAGCGAGCTCGTTAGTCa     <  1:2123732/68‑1 (MQ=14)
aaaTCCAGACGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACa     <  1:2148595/68‑1 (MQ=255)
 aaTCCAGAAGGAGTTCTGAGGTAATTACTGGATCTATCAACTGGAGTCCAAGCGAGCGCGTTAGACat    <  1:4611306/68‑2 (MQ=14)
   tCCAGATGGAGTTGTGAGGTCATTACTGGATCTATCTACACGAGTCCAAGCGAGCTCGTTAGACaata  <  1:1541307/68‑4 (MQ=14)
   tCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACactg  >  1:3969227/1‑65 (MQ=255)
   tCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACactg  >  1:1804744/1‑65 (MQ=255)
   tCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACactg  >  1:4373598/1‑65 (MQ=255)
   tCCAGATGGAGTTCTGAGGACAATACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACaata  >  1:1831264/1‑65 (MQ=14)
                                                                   |   
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGTTAGACA‑‑‑  >  Exported/3277‑3344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.