New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? KX077536 897 =743 (0.450)6 (0.000) 4/126 9.7 1.0% intergenic (–/‑202) –/unknown –/BLA
?KX077536 906 = 453 (0.290)intergenic (–/‑193) –/unknown –/BLA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 743 total aligned reads displayed.

CATACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA  >  KX077536/830‑914
                                                                   |                 
 cagcGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:2672324/65‑1 (MQ=255)
 aTACTATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:55726/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGTATTCTCACCAATAAAAATCGCCCGGCGGCAACCGAGCGt                  <  1:4573837/68‑1 (MQ=18)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCACCCGAGCGt                  >  1:3110233/1‑68 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:4240670/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1749959/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1926627/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:3248834/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:328773/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:3320636/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:3830545/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1071348/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:4274800/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:4335182/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:4740866/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:51032/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:630158/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1339211/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1539554/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1086931/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTCTAACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:1487184/68‑1 (MQ=255)
 aTACGATATAAGTTGTTACTAGTGCTTGGATTATCACCAATAAAAAACGCCCGGCGGCAACCGAGCGt                  <  1:4027805/68‑1 (MQ=255)
  tACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGtt                 <  1:2793367/68‑1 (MQ=255)
  tACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGtt                 <  1:4515291/68‑1 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:2644472/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:2406402/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:2512291/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:233756/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:2313329/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:3551348/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:4634403/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:4716894/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:2006689/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:2847342/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTc                >  1:3087380/1‑68 (MQ=255)
   aCGATATAAGTTGTTACTAGTGATTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGtta                >  1:2361483/1‑67 (MQ=255)
     gATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTg              >  1:2195194/1‑68 (MQ=255)
      atatAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGa             <  1:1248255/68‑1 (MQ=255)
      atatAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGa             <  1:340766/68‑1 (MQ=255)
      atatAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGa             <  1:3166774/68‑1 (MQ=255)
      atatAAGTTGTTACTAGTGCTTGGATACTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGa             >  1:478536/1‑68 (MQ=255)
       tataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGaa            <  1:1967598/68‑1 (MQ=255)
       tataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGaa            <  1:1668769/68‑1 (MQ=255)
       aataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGaa            <  1:1603957/67‑1 (MQ=255)
        ataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCTAGCGTTCTGAAc           >  1:911138/1‑68 (MQ=255)
        ataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAc           >  1:957686/1‑68 (MQ=255)
        ataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAc           >  1:4688812/1‑68 (MQ=255)
        ataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAc           >  1:3373002/1‑68 (MQ=255)
        ataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAc           >  1:1120463/1‑68 (MQ=255)
        ataAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAc           >  1:2264861/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:4599850/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:3979693/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:2439350/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:1302744/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        <  1:4367017/68‑1 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:4459966/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        <  1:2109475/68‑1 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:2759846/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        >  1:3212619/1‑68 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        <  1:300032/68‑1 (MQ=255)
           aGTTGTTACTAGTGCTTGGATTCACACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        <  1:767116/68‑1 (MQ=255)
           aGTTGTTACTAGTGCTTGGACTCTCACCAATAACAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa        <  1:681768/68‑1 (MQ=255)
            gttgttACTAGTGCTTGGATTCTCACCAATAATAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       <  1:4164463/68‑1 (MQ=255)
            gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       <  1:1707120/68‑1 (MQ=40)
            gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       >  1:1899000/1‑68 (MQ=40)
            gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       >  1:1855937/1‑68 (MQ=40)
            gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       >  1:4134089/1‑68 (MQ=40)
            gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       >  1:4047024/1‑68 (MQ=40)
            gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt       >  1:1561810/1‑68 (MQ=40)
             ttgttACTAGTGCTTGGATTCTCAGCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:793668/1‑68 (MQ=255)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAACCGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:4223842/1‑68 (MQ=255)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:2139353/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:3055152/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:1824732/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:830811/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:719662/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:1004443/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:2917412/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:1455415/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:1173467/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:20462/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:2716349/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:346586/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:3936415/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:223596/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:3505234/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      <  1:1389618/68‑1 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:4186679/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:2615934/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      >  1:3718009/1‑68 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      <  1:4300623/68‑1 (MQ=39)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGACAACCGAGCGTTCTGAACAAATc      >  1:2543174/1‑68 (MQ=255)
             ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCAGGCGGCAACCGAGCGTTCTGACCAAATc      >  1:3623925/1‑68 (MQ=255)
             tcattACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc      <  1:58772/65‑1 (MQ=1)
              tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc     >  1:2960335/1‑68 (MQ=37)
              tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc     >  1:1208867/1‑68 (MQ=37)
               gttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCa    >  1:1626204/1‑68 (MQ=35)
                ttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAg   <  1:3679867/68‑1 (MQ=33)
                 tACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGa  >  1:3782461/1‑68 (MQ=31)
                 tACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGa  >  1:4408007/1‑68 (MQ=31)
                                                                   |                 
CATACGATATAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA  >  KX077536/830‑914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.