| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | KX077536 | 897 = | 743 (0.450) | 6 (0.000) | 4/126 | 9.7 | 1.0% | intergenic (–/‑202) | –/unknown | –/BLA |
| ? | KX077536 | 906 = | 453 (0.290) | intergenic (–/‑193) | –/unknown | –/BLA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 532 total aligned reads displayed.
TAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAGGTG > KX077536/839‑973 | tgttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:136143/67‑1 (MQ=255) aattgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:263376/3‑68 (MQ=255) aGTTGTTACTGGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:3848763/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCTACCGAGCGTTCTGAACaaa > 1:4156992/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCACCCGAGCGGTCTGAACaaa > 1:925097/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:4722723/68‑1 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:4459966/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:4752761/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:479932/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:67071/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:3270713/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:2961332/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:2764578/68‑1 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:2734080/68‑1 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:1072322/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:2478113/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:2109475/68‑1 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:189626/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:1430325/68‑1 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:1708551/68‑1 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:1302744/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa > 1:1615452/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCAGGCCGCAACCGAGCGTTCTGAACaaa > 1:1974709/1‑68 (MQ=255) aGTTGTTACTAGTGCTTGGATTCACACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACaaa < 1:771575/68‑1 (MQ=255) gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt > 1:4134089/1‑68 (MQ=40) gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt > 1:4067266/1‑68 (MQ=40) gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt > 1:2818247/1‑68 (MQ=40) gttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAt < 1:3495078/68‑1 (MQ=40) ttgttTCTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4640887/1‑68 (MQ=25) ttgttACTAGTGCTTGGATTCTCTCCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGCACAAATc > 1:1147696/1‑68 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAGAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:3402325/1‑68 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGGGGCAACCGAGCGTTCTGAACAAATc > 1:833568/1‑68 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCCACCGAGCGTTCTGAACACATc > 1:544619/1‑68 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:3762890/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:3811911/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:346586/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:3680612/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:3222763/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:1551987/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:3531764/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4014161/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4038655/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4186679/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4316624/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4589725/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4618951/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:4694363/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:1240510/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:75814/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:1004443/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2047931/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:308550/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2139353/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2224790/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2331208/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2917412/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2590600/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:2654387/1‑68 (MQ=39) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAACGAGCGTTCTGAACAAATc > 1:4288649/1‑68 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGACAACCGAGCGTTCTGAACAAATc > 1:2543174/1‑68 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCAGCAACCGAGCGTTCTGAACAAATc < 1:146100/68‑1 (MQ=255) ttgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCAGGCGGCAACCGAGCGTTCTGACCAAATc > 1:3623925/1‑68 (MQ=255) ttgttACGAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATc > 1:717443/1‑68 (MQ=255) ttgttAATAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCACCCGAGCGTTCTGATCAAATc > 1:388904/1‑68 (MQ=11) tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCCACCGAGCGTTCTGAACAAATcc > 1:3175301/1‑68 (MQ=255) tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc > 1:806841/1‑68 (MQ=37) tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc > 1:3103353/1‑68 (MQ=37) tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc > 1:3304028/1‑68 (MQ=37) tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc > 1:1208867/1‑68 (MQ=37) tgttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATcc > 1:576172/1‑68 (MQ=37) gttACTTGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCa < 1:2414999/68‑1 (MQ=25) gttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCa > 1:1626204/1‑68 (MQ=35) ttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAg < 1:1945687/68‑1 (MQ=33) ttACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAg < 1:2376226/68‑1 (MQ=33) tACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGa < 1:4231352/68‑1 (MQ=31) tACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGa > 1:2252932/1‑68 (MQ=31) tACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGa < 1:243396/68‑1 (MQ=31) tCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGctct < 1:613634/68‑1 (MQ=31) tCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGctct < 1:4417599/68‑1 (MQ=31) tCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGctct < 1:1747704/68‑1 (MQ=31) tCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGctct < 1:1689253/68‑1 (MQ=31) aaCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAg < 1:1097178/68‑1 (MQ=39) aaCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAg < 1:457423/68‑1 (MQ=39) aaCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAg < 1:3053030/68‑1 (MQ=39) aaCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAg < 1:2293251/68‑1 (MQ=39) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:3021870/1‑68 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg < 1:2693989/68‑1 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:2169231/1‑68 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg < 1:2344951/68‑1 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:4341209/1‑68 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:2866432/1‑68 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg < 1:3655896/68‑1 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:3973317/1‑68 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:1925142/1‑68 (MQ=40) aCAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCGCTTCAgg > 1:1862100/1‑68 (MQ=255) aCAAATCCAGATGGAGTTCTGAGGACATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAgg > 1:4517782/1‑68 (MQ=255) cAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAGGt > 1:1814053/1‑68 (MQ=255) cAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAGGt > 1:4379447/1‑68 (MQ=255) cAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAGGt > 1:3197083/1‑68 (MQ=255) cAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAGGt > 1:1999535/1‑68 (MQ=255) | TAAGTTGTTACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCTTCAGGTG > KX077536/839‑973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |