| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | KX077536 | 7817 = | 1764 (1.070) | 8 (0.010) | 6/126 | 8.8 | 0.50% | coding (402/660 nt) | unknown | cat |
| ? | KX077536 | 7827 = | 1547 (1.000) | coding (412/660 nt) | unknown | cat | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1768 total aligned reads displayed.
ATTTCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCACCAGTTTTGA > KX077536/7750‑7885 | aTTTCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTc < 1:3696218/68‑1 (MQ=255)aTTTCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTc < 1:410319/68‑1 (MQ=255) ttCCGGCCGTTTCTCCACATATATTCGCAAGATGTGGCTTCTTACGGTGATAACCTGGCCTATTTcgg < 1:2409210/68‑3 (MQ=255) ttCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTccc < 1:3562034/68‑1 (MQ=255) ttCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTccc < 1:3527824/68‑1 (MQ=255) ttCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTccc < 1:640648/68‑1 (MQ=255) ttCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTccc < 1:127911/68‑1 (MQ=255) ttCAGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTccc < 1:1000562/68‑1 (MQ=255) gCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAg > 1:3948260/1‑68 (MQ=255) gCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAg < 1:1684527/68‑1 (MQ=255) gCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAg > 1:734584/1‑68 (MQ=255) agattCACCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:336060/65‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg > 1:909629/1‑68 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:2278987/68‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:4608574/68‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:2152395/68‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:4229892/68‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:1383656/68‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:1544375/68‑1 (MQ=255) aGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:1487054/68‑1 (MQ=255) aGTTGCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAggg < 1:1773277/68‑1 (MQ=255) ctcCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTAt > 1:3278938/1‑68 (MQ=255) ctcCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTAt < 1:4740881/68‑1 (MQ=255) ctcCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTAt > 1:4184969/1‑68 (MQ=255) acaTATATTCGCAAGATGTGGCGTGTTACTGTGAAATCCTGGCCTATTTCCCTAAAGGGTTTATTgag < 1:3400714/68‑1 (MQ=255) caTATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCGTATTTCCCTAAAGGGTTTATTgaga < 1:2704910/68‑1 (MQ=255) caTATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTgaga < 1:690405/68‑1 (MQ=255) caTATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTgaga < 1:1520739/68‑1 (MQ=255) tatatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAat > 1:3035600/1‑68 (MQ=255) tatatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAat > 1:4544953/1‑68 (MQ=255) tatatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAat > 1:1077708/1‑68 (MQ=255) tatatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAat > 1:1820990/1‑68 (MQ=255) atatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAata < 1:2089224/68‑1 (MQ=255) atatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAata < 1:4068065/68‑1 (MQ=255) atatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAata > 1:2739530/1‑68 (MQ=255) tatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAatat > 1:1036869/1‑68 (MQ=255) tatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAatat > 1:2518762/1‑68 (MQ=255) tatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAatat > 1:3488142/1‑68 (MQ=255) tatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAatat > 1:1321500/1‑68 (MQ=255) tatTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAatat > 1:3076955/1‑68 (MQ=255) atTCGCAAGATGTGGCGGGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATg < 1:3732987/68‑1 (MQ=255) ttCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGt > 1:2334418/1‑68 (MQ=255) ttCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGt < 1:1862839/68‑1 (MQ=255) ttCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGt > 1:2783836/1‑68 (MQ=255) tacGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGATTATGt > 1:4655450/3‑68 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAATCCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtt > 1:3611462/1‑68 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGTTTTATTGAGAATATGtt < 1:2209431/68‑1 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtt > 1:4327664/1‑68 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtt > 1:1218320/1‑68 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtt > 1:4395971/1‑68 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtt < 1:2679789/68‑1 (MQ=255) tCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtt > 1:2067529/1‑68 (MQ=255) cAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGttttt > 1:4283288/1‑68 (MQ=255) cAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGttttt > 1:192625/1‑68 (MQ=255) aaGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGtttttt > 1:2247686/1‑68 (MQ=255) aGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTg > 1:2828083/1‑68 (MQ=255) gATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTgg > 1:4697408/1‑67 (MQ=255) gATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGt < 1:1639912/68‑1 (MQ=255) gATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGt < 1:3870962/68‑1 (MQ=255) aTGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGtc > 1:2589860/1‑68 (MQ=255) tgtgGCGTGTTAAGGTGAAAACCTGGCCTATTTCCATAAAGGGTTTATTGAGAATATGTTTTTTGtct > 1:3233137/1‑68 (MQ=255) tgGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCa < 1:1438122/68‑1 (MQ=255) ggCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAg < 1:3447461/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:869622/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:4520341/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:3182425/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc > 1:4024027/1‑68 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:3988343/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:3771702/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:158982/68‑1 (MQ=255) gCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGc < 1:3329369/68‑1 (MQ=255) cGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGcc < 1:3808468/68‑1 (MQ=255) cGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGcc > 1:550448/1‑68 (MQ=255) cGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGcc > 1:1244345/1‑68 (MQ=255) cGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGcc > 1:2634555/1‑68 (MQ=255) gtgtTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCa > 1:3912976/1‑68 (MQ=255) gtgtTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCa > 1:48691/1‑68 (MQ=255) gtgtTACGGTGAAAACCTGGCCTAGTTCCCTAAAGGGAATATTGAGAATATGTTTTTTGTCTCAGCCa > 1:801347/1‑68 (MQ=255) gtTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAAt < 1:594077/68‑1 (MQ=255) gtTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAAt > 1:2448628/1‑68 (MQ=255) ttACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATc < 1:4139474/68‑1 (MQ=255) tACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATcc > 1:1972777/1‑68 (MQ=255) tACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATcc < 1:51339/68‑1 (MQ=255) aCGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATccc > 1:1170570/1‑68 (MQ=255) ggTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTg > 1:2997316/1‑68 (MQ=255) ggTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTg > 1:76959/1‑68 (MQ=255) gTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTgg < 1:1125144/68‑1 (MQ=255) gTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTgg < 1:2008372/68‑1 (MQ=255) gTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTgg < 1:293780/68‑1 (MQ=255) aaCCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAg < 1:2550336/68‑1 (MQ=255) aaCCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAg < 1:3129537/68‑1 (MQ=255) ccTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCATTCCCTGGGTGAGtt > 1:2881084/1‑68 (MQ=255) ccTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGtt > 1:946577/1‑68 (MQ=255) ccTGGCCTATTTCCCTAAAGGGTTTAGTGAGAATATGTTTTGTGTCTCAGCCAATCCCTGGGTGAGtt > 1:834922/1‑68 (MQ=255) tGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTc > 1:1897724/1‑68 (MQ=255) ccTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCAcc > 1:2369157/1‑68 (MQ=255) ccTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCAcc > 1:4459595/1‑68 (MQ=255) aTTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCACCAGt < 1:3648002/68‑1 (MQ=255) ttCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCACCAGttt > 1:1730228/1‑68 (MQ=255) tCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCACCAGtttt > 1:4422203/1‑68 (MQ=255) | ATTTCCGGCAGTTTCTCCACATATATTCGCAAGATGTGGCGTGTTACGGTGAAAACCTGGCCTATTTCCCTAAAGGGTTTATTGAGAATATGTTTTTTGTCTCAGCCAATCCCTGGGTGAGTTTCACCAGTTTTGA > KX077536/7750‑7885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |