New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 900NA (NA)26274 (1.420) 132/134 0.0 98.3% intergenic (‑108/‑111) aadA/fdh aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag
?Exported 906 = 462 (0.020)intergenic (‑114/‑105) aadA/fdh aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag

Only 100 of 27603 total aligned reads displayed.

CTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATCTCGAGACCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATAAT  >  Exported/839‑974
                                                                   |                                                                    
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagccctattgaaaa                                                                    >  1:3955840‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                    >  1:771686‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                    >  1:2653‑M2/66‑68 (MQ=255)
  tgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaaaa                                                                    >  1:2328316‑M2/66‑68 (MQ=255)
   gtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAg                                                                   >  1:1049815‑M2/65‑68 (MQ=255)
   gtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAg                                                                   >  1:1429633‑M2/65‑68 (MQ=255)
    tctcatgagctgatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                  <  1:3259745‑M2/5‑1 (MQ=255)
    tctcatgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAgg                                                                  <  1:2219475‑M2/5‑1 (MQ=255)
       catgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagaccaattgaAAAGGCTa                                                               >  1:383996‑M2/61‑68 (MQ=255)
         tgagcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTaaa                                                             <  1:6150561‑M2/10‑1 (MQ=255)
           agcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAAt                                                           >  1:1488962‑M2/57‑68 (MQ=255)
           agcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAAt                                                           <  1:5047062‑M2/12‑1 (MQ=255)
            gcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATg                                                          >  1:2767331‑M2/56‑68 (MQ=255)
            gcggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATg                                                          >  1:5881975‑M2/56‑68 (MQ=255)
             cggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGc                                                         <  1:2705234‑M2/14‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                        <  1:604344‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                        <  1:3673559‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                        >  1:1603225‑M2/54‑68 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                        <  1:5988223‑M2/15‑1 (MQ=255)
              ggatacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCt                                                        <  1:4011039‑M2/15‑1 (MQ=255)
                 tacatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCtata                                                     <  1:120516‑M2/18‑1 (MQ=255)
                 tacataattgaatgtctttagaaaaataatcaaatctcgagacctattgaAAAGGCTAAACTGCtata                                                     <  1:3209821‑M2/18‑1 (MQ=255)
                  acatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATaa                                                    >  1:2547884‑M2/50‑68 (MQ=255)
                   catatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAAt                                                   <  1:2099856‑M2/20‑1 (MQ=255)
                   aatatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAAt                                                   <  1:2279600‑M2/20‑1 (MQ=255)
                    atatttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAAtt                                                  >  1:2826906‑M2/48‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTATAATGCTATAATTcc                                                >  1:469737‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                                >  1:1763400‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                                >  1:4348468‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                                >  1:2943118‑M2/46‑68 (MQ=255)
                      atttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTcc                                                >  1:1319685‑M2/46‑68 (MQ=255)
                       tttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCa                                               >  1:1653308‑M2/45‑68 (MQ=255)
                        ttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCAc                                              <  1:3560938‑M2/25‑1 (MQ=255)
                        ttgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCAc                                              <  1:5485813‑M2/25‑1 (MQ=255)
                        ttgaatgtatttagaaaaataaacaaatcgcgagacctattgaAAAGGCTAAAATGCTATAATTCCAc                                              <  1:2487605‑M2/25‑1 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                             >  1:2435118‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                             >  1:2382335‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                             >  1:4988220‑M2/43‑68 (MQ=255)
                         tgaatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACt                                             >  1:571530‑M2/43‑68 (MQ=255)
                           aatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTca                                           <  1:300153‑M2/28‑1 (MQ=255)
                           aatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTca                                           >  1:3901819‑M2/41‑68 (MQ=255)
                           aatgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTca                                           <  1:4583507‑M2/28‑1 (MQ=255)
                            atgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcag                                          >  1:937703‑M2/40‑68 (MQ=255)
                            atgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcag                                          >  1:1000307‑M2/40‑68 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                         <  1:3501800‑M2/30‑1 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                         <  1:1926509‑M2/30‑1 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                         >  1:3318797‑M2/39‑68 (MQ=255)
                             tgtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagc                                         <  1:3377150‑M2/30‑1 (MQ=255)
                              gtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagca                                        >  1:5542842‑M2/38‑68 (MQ=255)
                              gtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTcagca                                        >  1:4472077‑M2/38‑68 (MQ=255)
                              gtatttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGATATAATTCAACTcagca                                        >  1:1149324‑M2/38‑68 (MQ=255)
                                atttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAgg                                      <  1:5261772‑M2/33‑1 (MQ=255)
                                 tttagaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGa                                     <  1:4068791‑M2/34‑1 (MQ=255)
                                     taaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCa                                 <  1:4871763‑M2/38‑1 (MQ=255)
                                     gaaaaataaacaaatctcgtgacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCa                                 >  1:3617246‑M2/31‑68 (MQ=255)
                                     gaaaaataaacaaatctcgagacctattgaAAAGGCTTAAATGCTATAATTCCACTCAGCAGGACGCa                                 >  1:1378246‑M2/31‑68 (MQ=255)
                                     gaaaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCa                                 >  1:5376147‑M2/31‑68 (MQ=255)
                                     gaaaaataaacaaatctcgagacatattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCa                                 <  1:509683‑M2/38‑1 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                               >  1:3105991‑M2/29‑68 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                               >  1:343682‑M2/29‑68 (MQ=255)
                                       aaaataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACt                               >  1:3789487‑M2/29‑68 (MQ=255)
                                         aataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGa                             <  1:715802‑M2/42‑1 (MQ=255)
                                          ataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGAc                            <  1:878942‑M2/43‑1 (MQ=255)
                                          ataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGAc                            <  1:4169670‑M2/43‑1 (MQ=255)
                                          ataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGAc                            <  1:5599469‑M2/43‑1 (MQ=255)
                                          ataaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGAc                            <  1:2882934‑M2/43‑1 (MQ=255)
                                            aaacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCg                          >  1:2044742‑M2/24‑68 (MQ=255)
                                             aacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGa                         <  1:4754491‑M2/46‑1 (MQ=255)
                                             aacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGa                         <  1:6099354‑M2/46‑1 (MQ=255)
                                             aacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGa                         <  1:655625‑M2/46‑1 (MQ=255)
                                             aacaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGa                         <  1:4528707‑M2/46‑1 (MQ=255)
                                              acaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCCCTCAGCAGGACGCACTGACCGaa                        >  1:422396‑M2/22‑68 (MQ=255)
                                              acaaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGaa                        >  1:1819661‑M2/22‑68 (MQ=255)
                                               caaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAAt                       <  1:1708309‑M2/48‑1 (MQ=255)
                                               caaatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAAt                       <  1:5430149‑M2/48‑1 (MQ=255)
                                                 aatctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTc                     <  1:5819542‑M2/50‑1 (MQ=255)
                                                   tctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCAc                   >  1:4285202‑M2/17‑68 (MQ=255)
                                                    gaCCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACt                  <  1:1098574/68‑1 (MQ=255)
                                                    ctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACt                  <  1:4410507‑M2/53‑1 (MQ=255)
                                                    ctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACt                  >  1:2159734‑M2/16‑68 (MQ=255)
                                                    ctcgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACt                  <  1:5149933‑M2/53‑1 (MQ=255)
                                                     aCCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTa                 >  1:3050884/1‑68 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg                <  1:5763762‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg                <  1:4116952‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg                <  1:5207383‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg                <  1:4812710‑M2/55‑1 (MQ=255)
                                                      cgagacctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAg                <  1:1268839‑M2/55‑1 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa            >  1:5661369‑M2/10‑68 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa            >  1:2603217‑M2/10‑68 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa            >  1:187302‑M2/10‑68 (MQ=255)
                                                          acctattgaAAAGGCTAAAATGCTATAAATCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTaa            >  1:3163486‑M2/10‑68 (MQ=255)
                                                           cctattgaAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAAt           >  1:5313537‑M2/9‑68 (MQ=255)
                                                               ttgaAAAGGCTAAAATGCTATAATTCCACTCATCAGGACGCACTGACCGAATTCACTAGTTAATAGaa       <  1:154469‑M2/64‑1 (MQ=255)
                                                                  aAAAGGCTAAAATGCTATAATTCCACTCAGCAGGGCGCACTGACCGAATTCACTAGTTAATAGAAATa    >  1:4643258‑M2/2‑68 (MQ=255)
                                                                  aAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATa    <  1:6199222‑M2/67‑1 (MQ=255)
                                                                  aAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATa    >  1:3728916‑M2/2‑68 (MQ=255)
                                                                   aaaGGCTAAAATGCTATAATTCCTCTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAaataa   >  1:5937921/1‑68 (MQ=255)
                                                                   aaaGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAaataa   >  1:829377/1‑68 (MQ=255)
                                                                   aaaGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAaataa   >  1:4929957/1‑68 (MQ=255)
                                                                   aaaGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAaataa   >  1:1987664/1‑68 (MQ=255)
                                                                   |                                                                    
CTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATCTCGAGACCTATTGACAATTAAAGGCTAAAATGCTATAATTCCACTCAGCAGGACGCACTGACCGAATTCACTAGTTAATAGAAATAAT  >  Exported/839‑974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.