| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4034000 = | 63 (1.110) | 1764 (2.020) +CTGTTGTT |
18/118 | 0.7 | 98.5% | intergenic (+4/+266) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | KX077536 | 1 = | 0 (0.000) | intergenic (–/‑1098) | –/unknown | –/BLA | |||||
Only 100 of 1834 total aligned reads displayed.
AAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCT > CP009273/4033933‑4034067 | aatatatccctaggtctagggcggcgtatttgtcctactcaggagagcgttcaccgacaaacaacaga > 1:786130‑M1/68‑68 (MQ=255)aatatatccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacaga > 1:2092669‑M1/68‑68 (MQ=255) atccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgactaacaacagATaaaa < 1:3776490‑M1/6‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcatgagagcgttcaccgacaaacaacagATAAAAc < 1:3582626‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:96274‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:4678378‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:4646445‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:3992058‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:3064858‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:27133‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:2607804‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:2405370‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:1766633‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:1335636‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAAc < 1:1193015‑M1/7‑1 (MQ=255) tccctaggtctagggcggcggatttgtcatactcaggagagagttcaccgacaaacaacagATAAAAc < 1:653662‑M1/7‑1 (MQ=255) ccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACg < 1:5563729‑M1/8‑1 (MQ=255) ccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACg > 1:3134427‑M1/61‑68 (MQ=255) ccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACg > 1:3342126‑M1/61‑68 (MQ=255) ccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACg > 1:4743255‑M1/61‑68 (MQ=255) ccctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACg > 1:1551118‑M1/61‑68 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgccaaacaacagATAAAACGa < 1:5638770‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa > 1:281877‑M1/60‑68 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:5178655‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:1373163‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:1488727‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa > 1:2496933‑M1/60‑68 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:2449497‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa > 1:2277167‑M1/60‑68 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:4291258‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:5451903‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa > 1:4167277‑M1/60‑68 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:61098‑M1/9‑1 (MQ=255) cctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa < 1:70168‑M1/9‑1 (MQ=255) cctagggctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGa > 1:1425094‑M1/60‑68 (MQ=255) ctaggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGaa < 1:4814811‑M1/10‑1 (MQ=255) taggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGaaa > 1:266394‑M1/58‑68 (MQ=255) taggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGaaa > 1:2361424‑M1/58‑68 (MQ=255) taggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGaaa > 1:1581137‑M1/58‑68 (MQ=255) aggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAg > 1:1252514‑M1/57‑68 (MQ=255) aggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAg < 1:5521695‑M1/12‑1 (MQ=255) ggtcttgggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAATACGAAAgg > 1:2176383‑M1/56‑68 (MQ=255) ggtctagggcggtggatttgtcctactcaggagagcgttcaacgacaaacaacagATAAAACGAAAgg > 1:2913749‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcgggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:5005908‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagctttcaccgacaaacaacagATAAAACTAAAgg > 1:3933157‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcactgacaaacaacagATAAAACGAAAgg > 1:277329‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:4554450‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:3839603‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg < 1:5483157‑M1/13‑1 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg < 1:5376888‑M1/13‑1 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:1135549‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:5324061‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:1711399‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:2139992‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg < 1:2059306‑M1/13‑1 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:3562085‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:3498180‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:1809488‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:1666669‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg < 1:3441659‑M1/13‑1 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:1618063‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:3411573‑M1/56‑68 (MQ=255) ggtctagggcggcggatttgtactactcaggagagcgttcaccgacaaacaacagATAAAACGAAAgg > 1:4778993‑M1/56‑68 (MQ=255) ggtctagggcggcggattagtcctactcaggagagcgttcaccgacaaacatcagATAAAACGAAAgg < 1:109430‑M1/13‑1 (MQ=255) ttctatggaggcggatttgtcctactaaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:4447441‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:52865‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:5256391‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:254950‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:5219697‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:2882734‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:1862435‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:223599‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:2007780‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:364390‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:10519‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:82155‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:867705‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:912109‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:5079837‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:3890499‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:4030714‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:4125962‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:4233609‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:4345038‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:4404731‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:368996‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:3291211‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:4604759‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:3224406‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:3172379‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:3014753‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:487853‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc < 1:4937674‑M1/14‑1 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGc > 1:2967004‑M1/55‑68 (MQ=255) gtctagggcggcggatttgtcctactcaggagagcattcaccgacaaacaacagATAAAACGAAAGGc > 1:4075583‑M1/55‑68 (MQ=255) ggcggcggatttgtcctactcaggagagcgttcaccgacaaacaacagATAAAACGAAAGGCTCAGTc > 1:10006‑M1/49‑68 (MQ=255) gTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTgg < 1:5601677/68‑1 (MQ=40) aCTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGttgttt > 1:5123818/1‑68 (MQ=35) acaaacaacagATAAAACGAAAGGCTCAGTCGAAAGACTGGGGCTTTCGTTTTATCTGTTGTTTGTCg < 1:4486462‑M1/57‑1 (MQ=255) gCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTTTCTGTTGTTTGTCGGTGa > 1:1928916/1‑68 (MQ=255) | AAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCT > CP009273/4033933‑4034067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |