| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 4209763 | 4232203 | 22441 | 54 [0] | [0] 109 | [aceK]–xylE | [aceK],arpA,iclR,metH,yjbB,pepE,rluF,yjbD,lysC,pgi,yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE |
AATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGC > CP009273/4209695‑4209828 | aaTTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCtt < 1:1628566/68‑1 (MQ=255) aTTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTg < 1:3507628‑M2/68‑2 (MQ=255) tACTGCTTCTGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggt > 1:4018556‑M2/1‑65 (MQ=255) cTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtga > 1:3364305‑M2/1‑63 (MQ=255) cTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtga > 1:2216696‑M2/1‑63 (MQ=255) tGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgat < 1:689212‑M2/68‑7 (MQ=255) tGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgat < 1:3972397‑M2/68‑7 (MQ=255) gCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatg < 1:38679‑M2/68‑8 (MQ=255) cTTCAGGAAGCAGCGGAAAAAATCACCGACCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgc > 1:4076482‑M2/1‑60 (MQ=255) ttCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgct < 1:4186402‑M2/68‑10 (MQ=255) tCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctg < 1:1534536‑M2/68‑11 (MQ=255) aGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgcc < 1:61079‑M2/68‑13 (MQ=255) aGGAAGCAGCGGAAAAAATCACCGAGCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgcc > 1:3025902‑M2/1‑56 (MQ=255) gAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaa < 1:2495542‑M2/68‑15 (MQ=255) aaGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctggcaac < 1:906813‑M2/68‑16 (MQ=255) agcagcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaact > 1:471503‑M2/1‑52 (MQ=255) agcagcGGAAAAAATCACCGAGCTCGGCGAACAAATTGTGAATCGCCATCTTggtgatgctgccaact > 1:1946498‑M2/1‑52 (MQ=255) gcagcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaactt < 1:3428379‑M2/68‑18 (MQ=255) gcaccGGAAAAAATCACCGATCTCGGCGAACAAATAGTGATTCGCCATCTTggtgatgctgccaactt < 1:3699059‑M2/68‑18 (MQ=255) cagcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaactta > 1:4982959‑M2/1‑50 (MQ=255) cagcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaactta > 1:4729866‑M2/1‑50 (MQ=255) cagcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaactta > 1:4613285‑M2/1‑50 (MQ=255) cGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactg > 1:1056721‑M2/1‑47 (MQ=255) ggAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactga > 1:1259093‑M2/1‑46 (MQ=255) aaaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttag > 1:3717799‑M2/1‑41 (MQ=255) aaaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttag > 1:3525381‑M2/1‑41 (MQ=255) aaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagt > 1:4012115‑M2/1‑40 (MQ=255) aaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagt > 1:2427941‑M2/1‑40 (MQ=255) aaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagt > 1:3329215‑M2/1‑40 (MQ=255) aaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagt > 1:2968790‑M2/1‑40 (MQ=255) aTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtg > 1:334775‑M2/1‑39 (MQ=255) tCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgt > 1:1836988‑M2/1‑38 (MQ=255) tCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgt > 1:1359606‑M2/1‑38 (MQ=255) tCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgt < 1:557785‑M2/68‑31 (MQ=255) tCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgt < 1:1558863‑M2/68‑31 (MQ=255) cGATCTCGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatga < 1:670830‑M2/68‑35 (MQ=255) cGGCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:13769‑M2/68‑41 (MQ=255) ggCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:1982302‑M2/1‑27 (MQ=255) ggCGAACAAATTGTGATGCGCCATCTTgcggaagctgccaacttactgatttagtgtatgatggtgtt > 1:2663589‑M2/1‑27 (MQ=255) gCGAACAAATTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgttt < 1:5220820‑M2/68‑43 (MQ=255) aaTTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt > 1:1760440‑M2/1‑19 (MQ=255) aaTTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt > 1:611096‑M2/1‑19 (MQ=255) aaTTGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggagtttttgaggt > 1:2679946‑M2/1‑19 (MQ=255) ttGTGATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc < 1:3047572‑M2/68‑52 (MQ=255) ttGTGATTCGCCATCTTgggcaggctgccaacttactgatttagtgtatgatggtgtttttgaggtgc > 1:5299826‑M2/1‑17 (MQ=255) tgtgATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct < 1:4134125‑M2/68‑53 (MQ=255) tgtgATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct < 1:3293584‑M2/68‑53 (MQ=255) tgtgATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct < 1:3510093‑M2/68‑53 (MQ=255) tgATTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc < 1:2199351‑M2/68‑55 (MQ=255) aTTCGCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag < 1:5129734‑M2/68‑57 (MQ=255) gCCATCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc < 1:3185753‑M2/68‑61 (MQ=255) tCTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct > 1:602335‑M2/1‑4 (MQ=255) cTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg < 1:198499‑M2/68‑66 (MQ=255) atggtgatgctggcaacttagtgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt > 1:5061829‑M2/2‑2 (MQ=255) | AATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGC > CP009273/4209695‑4209828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |