Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 4209763 4232203 22441 54 [0] [0] 109 [aceK]–xylE [aceK],arpA,iclR,metH,yjbB,pepE,rluF,yjbD,lysC,pgi,yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE

Only 100 of 109 total aligned reads displayed.

AAGGTAATCGAAAATATATAACTGGAATTATACTGGGTATTCATTCAGACCTGCCTTAGACCATTCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAT  >  CP009273/4232139‑4232271
                                                                 |                                                                   
tgcatgacaaagtcatcgcgcattatctgaacataaaacactatcaataagttggagtcattaccCTg                                                                   >  1:264252‑M2/66‑68 (MQ=255)
 gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGa                                                                  <  1:1101191‑M2/4‑1 (MQ=255)
 gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGa                                                                  <  1:773123‑M2/4‑1 (MQ=255)
   atgacaaagtcatcgggcattatcttaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:4998889‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgcacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:3177404‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagtttgagtcattaccCTGATc                                                                <  1:5399708‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:1621624‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:1679215‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:775875‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:2152610‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:888293‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:1308443‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:3486923‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:3387927‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:584933‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:5189889‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcattatctgaacataaaacactatcaataagatggagtcattaccCTGATc                                                                <  1:4289090‑M2/6‑1 (MQ=255)
   atgacaaagtcatcgggcaatatctgaacataaaacactatcaataagttggagtcattaccCTGATc                                                                <  1:3010798‑M2/6‑1 (MQ=255)
     gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCtt                                                              <  1:4874166‑M2/8‑1 (MQ=255)
     gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCtt                                                              <  1:39205‑M2/8‑1 (MQ=255)
        aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTa                                                           >  1:5308784‑M2/58‑68 (MQ=255)
        aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTa                                                           >  1:805893‑M2/58‑68 (MQ=255)
          agtcatcgggcattatctgaacataacacactatcaataagttggagtcattaccCTGATCTTTTATc                                                         <  1:5388302‑M2/13‑1 (MQ=255)
           gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCa                                                        >  1:2950532‑M2/55‑68 (MQ=255)
           gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCa                                                        >  1:4043597‑M2/55‑68 (MQ=255)
           gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCa                                                        >  1:2208618‑M2/55‑68 (MQ=255)
           gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTCATCTTTTATCa                                                        >  1:2681767‑M2/55‑68 (MQ=255)
            tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAg                                                       <  1:3031845‑M2/15‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:831811‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:535658‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGt                                                      <  1:2134718‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataagttggagacattaccCTGATCTTTTATCAGt                                                      <  1:2061034‑M2/16‑1 (MQ=255)
             catcgggcattatctgaacataaaacactatcaataacttgcagtcattaccCTGATCTTTTATCAGt                                                      <  1:5483255‑M2/16‑1 (MQ=255)
                  ggcattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCAtt                                                 >  1:4454209‑M2/48‑68 (MQ=255)
                    cattatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGa                                               <  1:1811113‑M2/23‑1 (MQ=255)
                    cataatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGa                                               <  1:4702616‑M2/23‑1 (MQ=255)
                     attatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGAt                                              <  1:4864052‑M2/24‑1 (MQ=255)
                     attatctgaacataaaacactagcaataaggtggagtcattaccCTGATCTTTTATCAGTGCATTGAt                                              <  1:834023‑M2/24‑1 (MQ=255)
                      ttatctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATg                                             <  1:5207882‑M2/25‑1 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:3159156‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:5410486‑M2/41‑68 (MQ=255)
                         tctgaacataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTg                                          >  1:510428‑M2/41‑68 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     <  1:329168‑M2/33‑1 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     <  1:4516134‑M2/33‑1 (MQ=255)
                              acataaaacactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAAtt                                     >  1:2914775‑M2/36‑68 (MQ=255)
                                     acactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGc                              >  1:571744‑M2/29‑68 (MQ=255)
                                     acactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGc                              >  1:4292180‑M2/29‑68 (MQ=255)
                                     acactatcaataagttggagtcattaccATGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGc                              >  1:527478‑M2/29‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCa                             >  1:1608945‑M2/28‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCa                             >  1:4054134‑M2/28‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCa                             >  1:4895774‑M2/28‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCa                             >  1:2101964‑M2/28‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCa                             >  1:4649581‑M2/28‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCa                             >  1:2723821‑M2/28‑68 (MQ=255)
                                      cactatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTAAGGCa                             >  1:5035852‑M2/28‑68 (MQ=255)
                                       actatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAg                            <  1:2006645‑M2/42‑1 (MQ=255)
                                       actatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAg                            <  1:463701‑M2/42‑1 (MQ=255)
                                        ctatcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGt                           >  1:3391682‑M2/26‑68 (MQ=255)
                                          atcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTa                         >  1:3287029‑M2/24‑68 (MQ=255)
                                          atcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTa                         >  1:4805072‑M2/24‑68 (MQ=255)
                                           tcaataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTaa                        >  1:559145‑M2/23‑68 (MQ=255)
                                            caataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAg                       >  1:3509770‑M2/22‑68 (MQ=255)
                                             aataagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAgg                      >  1:5251115‑M2/21‑68 (MQ=255)
                                               taagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTaaggaa                    >  1:197711‑M2/19‑66 (MQ=255)
                                               taagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCa                    >  1:389858‑M2/19‑68 (MQ=255)
                                               taagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCa                    >  1:740258‑M2/19‑68 (MQ=255)
                                               taagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCa                    >  1:3009583‑M2/19‑68 (MQ=255)
                                               taagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCa                    >  1:4529568‑M2/19‑68 (MQ=255)
                                               taagttggagtcattaccCTGATCATTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGGTAAGGCa                    >  1:3926051‑M2/19‑68 (MQ=255)
                                                aagttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCaa                   <  1:3476799‑M2/51‑1 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCTGGCAGTTAAGGCAAt                  >  1:2946247‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:1103014‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:5636128‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:1464437‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:456855‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:3875482‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:3732653‑M2/17‑68 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  <  1:3291727‑M2/52‑1 (MQ=255)
                                                 agttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAt                  >  1:3215236‑M2/17‑68 (MQ=255)
                                                  gttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAAtt                 <  1:1220954‑M2/53‑1 (MQ=255)
                                                   ttggagtcattaccCTGATCTTTTTTCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTa                >  1:3399689‑M2/15‑68 (MQ=255)
                                                   ttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTa                >  1:5165737‑M2/15‑68 (MQ=255)
                                                   ttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTa                >  1:2149944‑M2/15‑68 (MQ=255)
                                                   ttggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTa                >  1:2929467‑M2/15‑68 (MQ=255)
                                                     ggagtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATc              <  1:978834‑M2/56‑1 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCACTTATCAt            >  1:5071423‑M2/11‑68 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            >  1:3766818‑M2/11‑68 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            <  1:2047595‑M2/58‑1 (MQ=255)
                                                       agtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            >  1:1597026‑M2/11‑68 (MQ=255)
                                                       aggcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAt            <  1:2800057‑M2/58‑1 (MQ=255)
                                                        gtcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAtt           >  1:4223517‑M2/10‑68 (MQ=255)
                                                         tcattaccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCAttt          >  1:57567‑M2/9‑68 (MQ=255)
                                                             taccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTa      >  1:2082919‑M2/5‑68 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACa    >  1:123501‑M2/3‑68 (MQ=255)
                                                               ccCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACa    >  1:2316039‑M2/3‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:5585349‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:3125701‑M2/2‑68 (MQ=255)
                                                                cCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACaa   >  1:3225140‑M2/2‑68 (MQ=255)
                                                                 cTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAt  >  1:1791516/1‑68 (MQ=255)
                                                                 cTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAt  >  1:4902006/1‑68 (MQ=255)
                                                                 |                                                                   
AAGGTAATCGAAAATATATAACTGGAATTATACTGGGTATTCATTCAGACCTGCCTTAGACCATTCTGATCTTTTATCAGTGCATTGATGTTGGAATTGTCAGGCAGTTAAGGCAATTATCATTTTTTACAAT  >  CP009273/4232139‑4232271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: