| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1958445 | 19 (0.310) | 37 (0.600) | 31/388 | 0.7 | 67.3% | noncoding (76/80 nt) | micL | small regulatory RNA MicL‑S |
| ? | NC_000913 | 1958449 = | 17 (0.270) | noncoding (72/80 nt) | micL | small regulatory RNA MicL‑S | |||||
ACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1958185‑1958445‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCAT > NC_000913/1958449‑1958747 ACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAATTTT‑AAATCCCCATAATTTAATGTGAAATATATACAAT‑ATTTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAAGC‑GA‑G‑C‑CTGATT‑GAAT‑‑‑‑CA‑GGGGCCTGGTACGAGGCAAGCATCATATTGG > 1:376740/1‑314 ACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAGTTTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑ATTTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCGTT‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGG > 1:1211941/1‑281 TATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑GC‑C‑C‑CTGTTG‑‑AAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑‑AAAATCATTTGGCCTGATGG‑CG‑TTCAATG‑TTCCTTcatt > 1:1211949/1‑293 TTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTTAAAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑ATTTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCGTT‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAG‑C‑AG‑C‑C‑TTGATT‑GAAT‑‑‑‑CA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGC > 1:376757/1‑244 GCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAA > 1:1211955/1‑242 GCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑G‑CA‑G‑C‑CTGATT‑GAA‑‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACCTGCCG‑CCCCGTCTACGCATATAACGCG‑AAT > 1:376766/1‑300 AG‑TTTTAGTAA‑TTT‑AAAT‑‑CCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑‑AAA‑G‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGG‑CTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTG < 1:1211960/205‑1 TTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑‑AAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AAT > 1:1211964/1‑271 TTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑‑AAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATA > 1:1211963/1‑260 T‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GC > 1:1211965/1‑152 CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAG‑A‑‑C‑G‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGG > 1:376777/1‑133 TAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑‑‑AA‑A‑GC‑C‑C‑TCGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGAC‑ATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATG > 1:376778/1‑338 A‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑G‑AC‑C‑G‑CCGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑‑CAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCA‑TTGGCCTGATGG‑CG‑TTCAATGATTCC‑TTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACA > 1:376779/1‑274 TG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑AG‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑‑AAAATCATTTGGCCTGATGGACG‑TTCAATGgat > 1:1211968/1‑195 AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑AG‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGA > 1:1211970/1‑267 TATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTC > 1:1211972/1‑196 TACAATAA‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑TCCGTTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑CTCGTTTGAAAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGC > 1:1211975/1‑155 TACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑CTC‑CGTTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACGCATATAACGCG‑AATACTCGTCCGCGTGT > 1:1211976/1‑253 TACAAT‑A‑TTTTATGCACAACACTATGCGCACTGTCACCCGCTCAACAGATCACGGTTATT‑CGTTCG‑‑‑TTTTTTATT‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGAT > 1:1211974/1‑287 TTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑AG‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACCTGCCG‑CCCC‑TCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGT > 1:1211984/1‑240 CAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCGTTTTTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAG‑A‑‑C‑G‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CGTTTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCGAAATACTCGTCCGCGTGTT > 1:376789/1‑239 CGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAA > 1:1211986/1‑128 CACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑AGGC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG < 1:1211980/206‑1 GTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑G‑AC‑G‑C‑CCGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCG‑CATG‑TGCAACGGT‑‑AAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTC‑TTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑A > 1:376794/1‑198 GTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAG‑A‑CC‑G‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑‑CAAGCATCATATTGGGCGACATGATGCAACGGT‑‑AAAATCA‑TTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGT > 1:376793/1‑214 TCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCT > 1:1211987/1‑289 CAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑GCAG‑C‑CTGATT‑GAA‑‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATT‑CGATAACGCATCGGTGAGGCTGCCGACGCTCCCGC‑GAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTc > 1:376795/1‑321 ACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCAGGGGAT‑AAAAGA‑CG‑C‑C‑CTGTTG‑AAAT‑‑TGCAGGGGGCCTGGTACGA‑GCAAGCATCATATTGGGCG‑CATGATGCAACGGTAAAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCCGTCTACGCATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATG > 1:376796/1‑221 CACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCC > 1:1211989/1‑167 GTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑GC‑C‑T‑AGCCTG‑AATTGAATCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGT > 1:376798/1‑237 CG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑AGGC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATACTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACCTGCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCAgcgc > 1:376799/1‑245 tTTTTTTA‑TAACTGTTCA‑GGGAT‑‑AAA‑G‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGG‑CTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGTCAAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGC < 1:1211995/139‑1 TTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGC > 1:1211994/1‑292 TTTTA‑T‑ACTGTTCA‑GGGATAAAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGG > 1:1211992/1‑228 AAAA‑A‑GC‑C‑C‑TCGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGC > 1:1211998/1‑295 AAAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATAT‑ACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCAT > 1:1211997/1‑303 AAA‑A‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTT > 1:1212004/1‑107 ACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATATACAAT‑A‑TTTTTAGCACAACGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTA‑T‑CGTTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑GGGAT‑AAAA‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1958185‑1958445‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GC‑C‑C‑CTGTTG‑AAAT‑‑TGCA‑GGGGCCTGGTACGA‑GCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGGCCTGATGG‑CG‑TTCAATGATTCCTTTCATTTCAGCAACC‑GCCG‑CCCCGTCTACG‑ATATAACGCG‑AATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCAT > NC_000913/1958449‑1958747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |