New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1958445	19 (0.310)	37 (0.600)	31/388	0.7	67.3%	noncoding (76/80 nt)	micL	small regulatory RNA MicL‑S
	?	NC_000913	1958449 =	17 (0.270)					noncoding (72/80 nt)	micL	small regulatory RNA MicL‑S

ATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCGTCTACG‑ATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGA‑TTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCT  >  NC_000913/1958168‑1958736                                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                           aTTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑ATTTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑AAA‑‑GCCCCTGTTGa                                                                                                                                                                                                                                                                                             >  1:1211913/1‑292 (MQ=255)                  aCAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAATTTT‑AAATCCCCATAATTTAATGTGAAATATA‑TACAAT‑ATTTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAAGCgagcctgattgaatcaggggcctggtacgaggcaagcatcatattgg                                                                                                                                                                                                                                                             >  1:376740‑M1/1‑267 (MQ=255)                           tAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑aaaa‑aagcc                                                                                                                                                                                                                                                                                                        >  1:1211927/1‑253 (MQ=255)                                                   acacTGCCTGAAACAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAGTTTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑ATTTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCGTT‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattggg                                                                                                                                                                                                                                                           >  1:1211941‑M1/1‑232 (MQ=255)                                                          cTGAAACAATCGATAAAGAAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCAC‑G‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAG‑CCTA‑GCCTGAATTGAA‑‑T‑CAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCA‑TTCAGCAACC‑GCCGcccc                                                                                                                                                                       >  1:376749/1‑345 (MQ=255)                                                               aCAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCGT‑‑TTTTTTA‑T‑ACTGTTCG‑A‑GGAT‑‑‑‑‑aaaa‑aaaaaaa                                                                                                                                                                                                                                                                                                      <  1:1211938/223‑5 (MQ=255)                                                                                      tattaCAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Agcccctgttgaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaatcatttggcctgatggcgttcaatgttccttcatt                                                                                                                                                                                                    >  1:1211949‑M1/1‑193 (MQ=255)                                                                                      ctttcgtaTGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑‑CCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGc                                                                                                                                                                                    <  1:1211952/303‑1 (MQ=255)                                                                                        ttaCAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTTAAAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑ATTTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCGTT‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAG‑Cagccttgattgaatcaggggcctggtacgagcaagcatcatattgggc                                                                                                                                                                                                                                                            >  1:376757‑M1/1‑196 (MQ=255)                                                                                                   tCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCG‑A‑GGAT‑‑‑‑‑aaaa‑aaa                                                                                                                                                                                                                                                                                                          <  1:1211948/183‑1 (MQ=255)                                                                                                            gCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaa                                                                                                                                                                                                                                      >  1:1211955‑M1/1‑172 (MQ=255)                                                                                                                               gCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Gcagcctgattgaatgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaacctgccgccccgtctacgcatataacgcgaat                                                                                                                                                         >  1:376766‑M1/1‑153 (MQ=255)                                                                                                                                                      aG‑TTTTAGTAA‑TTT‑AAAT‑‑CCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑‑AAA‑Ggcccctgttgaaattgcaggggctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttg                                                                                                                                                                                                                               <  1:1211960‑M1/205‑78 (MQ=255)                                                                                                                                                           ttAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaat                                                                                                                                                            >  1:1211964‑M1/1‑127 (MQ=255)                                                                                                                                                           ttAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgata                                                                                                                                                                      >  1:1211963‑M1/1‑126 (MQ=255)                                                                                                                                                                     t‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagc                                                                                                                                                                                                                                                                          >  1:1211965‑M1/1‑118 (MQ=255)                                                                                                                                                                            cccATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAG‑Acgcctgttgaaattgcagggg                                                                                                                                                                                                                                                                                       >  1:376777‑M1/1‑112 (MQ=255)                                                                                                                                                                                taa‑ttaatGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑‑‑AA‑Agccctcgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacatccttgattacgataacgcatcggtgaggcttgccacgctcccgcggagctatg                                                                    >  1:376778‑M1/1‑106 (MQ=255)                                                                                                                                                                                  a‑ttaatGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Gaccgccgttgaaattgcaggggcctggtacgacaagcatcatattgggcgacatgatgcaacggtaaaaatcattggcctgatggcgttcaatgattccttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgaca                                                                                                                                   >  1:376779‑M1/1‑105 (MQ=255)                                                                                                                                                                                       atGTG‑AATATATTACAAT‑A‑‑TTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTATT‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑‑‑GGAT‑‑‑‑‑‑AAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGG‑CTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCGTCTACG‑ATATAACGCGAATACTCGTCCGCGTGTTc                                                                                                                                  <  1:1211962/264‑1 (MQ=255)                                                                                                                                                                                          tg‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Aagccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaatcatttggcctgatggacgttcaatggat                                                                                                                                                                                                         >  1:1211968‑M1/1‑99 (MQ=255)                                                                                                                                                                                             aaTATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Aagccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatga                                                                                                                                  >  1:1211970‑M1/1‑97 (MQ=255)                                                                                                                                                                                               tata‑taCAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattc                                                                                                                                                                                                        >  1:1211972‑M1/1‑96 (MQ=255)                                                                                                                                                                                               tata‑taCAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑‑AAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCGTCTACG‑ATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGA‑TTACGAt                                                                                                 >  1:1211971/1‑290 (MQ=255)                                                                                                                                                                                                    taCAATAA‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑TCCG‑‑‑‑‑TTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agccctcgtttgaaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgc                                                                                                                                                                                                                                              >  1:1211975‑M1/1‑93 (MQ=255)                                                                                                                                                                                                    taCAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcctccgtttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgcatataacgcgaatactcgtccgcgtgt                                                                                                                                           >  1:1211976‑M1/1‑92 (MQ=255)                                                                                                                                                                                                    taCAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑GAAG‑‑‑CCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAAATCATTTGGTCCTGA‑TGGCGTTCAATGATTcc                                                                                                                                                                                                >  1:376783/1‑195 (MQ=255)                                                                                                                                                                                                    taCAAT‑A‑TTTTATGCACAACACTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTATT‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTATT‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgat                                                                                                           >  1:1211974‑M1/1‑94 (MQ=255)                                                                                                                                                                                                      cAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑‑AAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAAcc                                                                                                                                                                                >  1:1211979/1‑208 (MQ=255)                                                                                                                                                                                                           a‑tTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑GT‑‑‑‑‑TTCGT‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATAAAAAAAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGG‑CTGGTACGagcaag                                                                                                                                                                                                                                                                   <  1:1211967/130‑1 (MQ=255)                                                                                                                                                                                                                ttAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Aagccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaacctgccgcccctctacgatataacgcgaatactcgtccgcgtgt                                                                                                                                             >  1:1211984‑M1/1‑81 (MQ=255)                                                                                                                                                                                                                      caACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCGTTTTTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAG‑Acgcctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgtttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaaatactcgtccgcgtgtt                                                                                                                                           >  1:376789‑M1/1‑78 (MQ=255)                                                                                                                                                                                                                            tATGCGCACCTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑TC‑‑‑‑‑GTCG‑‑‑TTTTTTA‑T‑ACTGTTGG‑GATAAA‑‑‑‑‑AAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGG‑CTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCa                                                                                                                                                                                                        <  1:1211981/166‑1 (MQ=255)                                                                                                                                                                                                                            tATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑AAAGAGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCG‑CATGATGCAACGGT‑AAAAATCATTTGG‑CCTGACTGGCGTTCAATGATTCCTTTCATTTCAGCAACCTGCCGCCCCGTCTACGCATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTTACGATAACGCATCGGTGAGGCTTGCCACg                                                                         >  1:376791/1‑294 (MQ=255)                                                                                                                                                                                                                                cgcA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaa                                                                                                                                                                                                                                              >  1:1211986‑M1/1‑66 (MQ=255)                                                                                                                                                                                                                                 gcA‑CTGTCACCCGCTCAACAGATCACGGTATTATT‑CGTTGTTTTTT‑‑‑TTTTTTA‑TAACTGTTCA‑G‑GGAA‑‑‑‑‑TAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGcatca                                                                                                                                                                                                                                                              <  1:376785/118‑1 (MQ=255)                                                                                                                                                                                                                                  cA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Aggcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcg                                                                                                                                                             <  1:1211980‑M1/206‑144 (MQ=255)                                                                                                                                                                                                                                       gTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Gacgcccgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgcatgtgcaacggtaaaatcatttggcctgatggcgttcaatgattcctttctttcagcaaccgccgccccgtctacgatataacgcga                                                                                                                                                                 >  1:376794‑M1/1‑59 (MQ=255)                                                                                                                                                                                                                                       gTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑‑TTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAG‑Accgcctgttgaaattgcaggggcctggtacgacaagcatcatattgggcgacatgatgcaacggtaaaatcattggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgt                                                                                                                                                >  1:376793‑M1/1‑58 (MQ=255)                                                                                                                                                                                                                                       gTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TT‑G‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGcatca                                                                                                                                                                                                                                                              <  1:376788/103‑1 (MQ=255)                                                                                                                                                                                                                                        tCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcggtgaggcttgccacgctcccgcggagct                                                                      >  1:1211987‑M1/1‑59 (MQ=255)                                                                                                                                                                                                                                                 cAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Agcagcctgattgaatgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattcgataacgcatcggtgaggctgccgacgctcccgcgagctatggacttccagcactccggcatcgaggaagtggtgcaggtttc                           >  1:376795‑M1/1‑49 (MQ=255)                                                                                                                                                                                                                                                   aCAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCAGG‑GGAT‑‑‑‑‑AAAAGAcgccctgttgaaattgcagggggcctggtacgagcaagcatcatattgggcgcatgatgcaacggtaaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgcccccgtctacgcatataacgcgaatactcgtccgcgtgttcatctgatg                                                                                                                                >  1:376796‑M1/1‑49 (MQ=255)                                                                                                                                                                                                                                                         cACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgcccc                                                                                                                                                                               >  1:1211989‑M1/1‑42 (MQ=255)                                                                                                                                                                                                                                                                      cg‑‑‑‑‑ttcg‑‑‑ttTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑AAAG‑G‑CCCTGTTGAAATTgaa                                                                                                                                                                                                                                                                                      >  1:1211990/1‑50 (MQ=255)                                                                                                                                                                                                                                                                       g‑‑‑‑‑ttcg‑‑‑ttTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Agcctagcctgaattgaatcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcggt                                                                                              >  1:376798‑M1/1‑31 (MQ=255)                                                                                                                                                                                                                                                                               cg‑‑‑ttTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑Aggcccctgttgaaattgcaggggcctggtacgagcaagcatcatactgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaacctgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcggtgaggcttgccagcgc                                                                               >  1:376799‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                                                                                   ttttttta‑TAACTGTTCA‑G‑GGAT‑‑‑‑‑‑AAA‑Ggcccctgttgaaattgcaggggctggtacgagcaagcatcatattgggcgacatgatgcaacggtcaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagc                                                                                                                                                                                           <  1:1211995‑M1/139‑114 (MQ=255)                                                                                                                                                                                                                                                                                      ttttA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcggtgaggcttgccacgctcccgcggagctatggacttccagcactccggcatcgaggaagtggtgc                                 >  1:1211994‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                                                                                      ttttA‑T‑ACTGTTCA‑G‑GGATA‑‑‑‑AAAA‑Agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcgg                                                                                                 >  1:1211992‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                                                                                      ttttA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑‑AAA‑AAAG‑ACCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCGTCTACG‑ATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGA‑TTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCa                                      >  1:1211993/1‑278 (MQ=255)                                                                                                                                                                                                                                                                                                   tCA‑G‑GGATA‑‑‑‑AAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGG‑CTGGTACGAGCAAGCATCATATTGGGCg                                                                                                                                                                                                                                                     <  1:1211991/67‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                  aaaa‑agccctcgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatataacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcggtgaggcttgccacgctcccgcggagctatggacttccagcactccggcatcgaggaagtggtgcaggttttctgcacggactcctgc          >  1:1211998‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                                                                  aaaa‑agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctttcatttcagcaaccgccgccccgtctacgatatacgcgaatactcgtccgcgtgttcatctgatgacatggacaatccttgattacgataacgcatcggtgaggcttgccacgctcccgcggagctatggacttccagcactccggcatcgaggaagtggtgcaggttttctgcacggactcctgctccggccat  >  1:1211997‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                                                                   aaa‑agcccctgttgaaattgcaggggcctggtacgagcaagcatcatattgggcgacatgatgcaacggtaaaaatcatttggcctgatggcgttcaatgattcctt                                                                                                                                                                                                     >  1:1212004‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                                                                       aaaG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCGTCTACGCATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGA‑TTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTcc                                          >  1:1212005/1‑253 (MQ=255)                                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                           ATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAG‑AATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATATATATTTATCAG‑TTTTAGTAA‑TTT‑AAAT‑CCCATAA‑TTAATGTG‑AATATA‑TACAAT‑A‑TTTTTAGCACAACGCTATGCGCA‑CTGTCACCCGCTCAACAGATCACGG‑‑TTA‑T‑CG‑‑‑‑‑TTCG‑‑‑TTTTTTA‑T‑ACTGTTCA‑G‑GGAT‑‑‑‑‑AAAA‑AAAG‑GCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGT‑AAAAATCATTTGG‑CCTGA‑TGGCGTTCAATGATTCCTTTCATTTCAGCAACC‑GCCGCCCCGTCTACG‑ATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGA‑TTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCT  >  NC_000913/1958168‑1958736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.