| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 258632 = | 31 (0.500) | 48 (0.810) +TTT |
18/372 | 1.8 | 61.8% | noncoding (44/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 279886 | NA (NA) | noncoding (45/768 nt) | IS1 | repeat region | |||||
CCCATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGC‑GGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGC‑TT‑TTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGTTCC‑GGTAAAAGACACTGAAGTGGTTGAACGACTGG > NC_000913/258400‑258893 | cccATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGC‑GGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGC‑TT‑TTGCCGTTACGCA‑CA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGt < 1:742285/282‑1 (MQ=17) caacgccattcatggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagtcagagatagcgctgatgtccggcagtgcttttgccgttacgcaccaccccgtcagtagctgaaccaggagggacagctgataggaaacgagaagccactggagcaccatcaaaacacca < 1:745747‑M1/6‑6 (MQ=255) ttCTGGTGCGTACCGGGTTGAGAAGC‑GGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGC‑TT‑TTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑Tg < 1:742303/266‑1 (MQ=255) gggTTGAGAAGC‑GGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGC‑GTGC‑TT‑TTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACACATAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCaaa > 1:742312/1‑221 (MQ=255) ttGAGAAGCAGGTG‑AAGTGAACTGCAGTTGCCATG‑TTTA‑GGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTT‑TTGCCGTTACGCACCACCCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGa < 1:27380/238‑1 (MQ=14) agagcagagatagcgctgatgtccggcagtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaAAAA‑‑‑CACca‑tc‑at < 1:30965‑M1/13‑1 (MQ=255) aGCGCTGATGTCCGGCGGTGC‑TT‑TTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGAt < 1:742324/162‑1 (MQ=255) gcTGATGTCCGGC‑GTGC‑TTCTTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑TAAA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTggtctg > 1:742340/1‑185 (MQ=17) cTGATGTCCGGCGGTGC‑TT‑TTGCCGTTACGCA‑CA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑a < 1:742331/141‑1 (MQ=14) gC‑TT‑TTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGACAAGCTGATAGAAAACAGAAGCCACTGGAGC‑A‑CCTCCAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AGTT‑AA‑‑GTTGGCAG‑CATCCACCTG‑a < 1:27497/132‑1 (MQ=11) cggcgtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaa < 1:378749‑M1/1‑1 (MQ=255) tttgccgttacgcaccaccccccgtcagtagctgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaaaacacc < 1:708733‑M1/7‑5 (MQ=255) ttttgccgtttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaac < 1:378778‑M1/4‑2 (MQ=255) ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaa > 1:27642‑M1/83‑83 (MQ=255) cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaa < 1:31049‑M1/1‑1 (MQ=255) cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCACTC‑ATACAC‑taaaa < 1:568393‑M1/23‑2 (MQ=255) tttgccgttacgcaccacccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaa > 1:2372‑M1/82‑82 (MQ=255) ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaa < 1:742618‑M1/2‑1 (MQ=255) gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaaaca < 1:2550‑M1/6‑3 (MQ=255) acgcaccacccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAAA‑‑CACCA‑TC‑ATACAC‑TAAAATC‑AG‑T‑AAA‑GTTgg < 1:378801‑M1/36‑1 (MQ=255) tcgcaccacccccgtcagagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAACA‑‑C‑CCA‑TC‑ATACAC‑Taa > 1:568388‑M1/72‑91 (MQ=255) acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctccaaAAAA‑‑‑CACca‑t > 1:2448‑M1/72‑81 (MQ=255) acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaaca < 1:31092‑M1/5‑3 (MQ=255) acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaac < 1:2559‑M1/4‑2 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAAA‑‑CACCA‑TC‑ATa < 1:378807‑M1/15‑1 (MQ=255) cccGTCAGTAGCTGGAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GACAAGATAATTCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTc < 1:27706/160‑1 (MQ=18) ccccgtcagtagctgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaaaa < 1:31106‑M1/3‑1 (MQ=255) accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaa < 1:2564‑M1/2‑1 (MQ=255) ccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑a < 1:378813‑M1/24‑1 (MQ=255) tCAGTAGCTGGAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GC‑AAGATAATTCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgg‑a < 1:742614/201‑1 (MQ=255) tCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAag > 1:742630/1‑277 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑‑TACAC‑Taaa < 1:31107‑M1/20‑1 (MQ=255) cAGTAGCTGGAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGAt < 1:27714/118‑1 (MQ=255) cAGTAGCT‑GAACAGGA‑GGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGTAAAGT‑GCAAAGATAATTCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgg‑a < 1:742615/200‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaAAAAAA‑CACCA‑TC‑ATACAC‑TAAAATc‑ag‑t‑aaagtt < 1:378843‑M1/35‑5 (MQ=255) agtagctgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaAAAAA‑‑CACCACTC‑ATACAC‑TAAA‑TC‑a < 1:30208‑M1/26‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaacac < 1:2573‑M1/6‑4 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaacac < 1:378845‑M1/6‑4 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaaca < 1:568479‑M1/5‑3 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaac < 1:27746‑M1/4‑2 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaa < 1:27747‑M1/3‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaa < 1:746000‑M1/2‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAAA‑‑CACCACTC‑ATAcac‑taaacagt < 1:30211‑M1/27‑5 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AAAAGTTGGCAGGCAT‑Ca < 1:27749‑M1/44‑1 (MQ=255) gCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑a < 1:27727/96‑1 (MQ=32) gCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑‑TTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCa > 1:742633/1‑162 (MQ=255) gCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑T‑AA‑TC‑AG‑TAAA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggt > 1:27754/1‑191 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaa < 1:2575‑M1/2‑1 (MQ=255) t‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGTTCC‑GGTAAAAGACACTGAAGTgg < 1:742622/297‑1 (MQ=255) gctgaacaggagggacagctgataagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATac < 1:30222‑M1/15‑1 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaa < 1:30217‑M1/2‑1 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaa < 1:378849‑M1/1‑1 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaaac < 1:568377‑M1/4‑2 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAAA‑‑CACCA‑TC‑ATACAC‑t < 1:378853‑M1/19‑1 (MQ=255) tgaacaggagggacagctgatagaaaacagaagccactggagcacctcaaaaaaaaaa < 1:2583‑M1/7‑3 (MQ=255) aaCAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑tttt < 1:27726/121‑1 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AAA‑GTTGGCAG‑Catt < 1:31118‑M1/41‑2 (MQ=255) ggaggGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCaa < 1:742629/142‑1 (MQ=255) gaggGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑ACCCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGTTCC‑GGT‑AAAGACACTGa > 1:27758/1‑285 (MQ=255) ggAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCg < 1:742626/116‑1 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaaac < 1:2587‑M1/4‑2 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaa < 1:30230‑M1/2‑1 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaa < 1:747566‑M1/1‑1 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaa < 1:746058‑M1/1‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATa < 1:2590‑M1/14‑1 (MQ=255) gATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑TAAA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTGATCTGGTCTTGTATGCGTCAA‑CGTGAAACCg > 1:742640/1‑144 (MQ=21) gatagaaacagaagccactggagcacctcaaaAAAAAAACACCA‑TC‑ATACAC‑TAAA‑TC‑ag‑t‑aaagt < 1:378898‑M1/34‑4 (MQ=255) gatagaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATACAC‑Taaa < 1:30232‑M1/21‑1 (MQ=255) atagaaCAGAAGCCACTGGAGCAA‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑ttttt < 1:27753/199‑2 (MQ=255) gaaacagaagccactggagcacctcaaaAAAA‑‑‑CACCA‑TC‑ATACAC‑TAAAATC‑AG‑T‑AAA‑GTTGGCAG‑CAT‑c < 1:378917‑M1/42‑1 (MQ=255) aaaCAGAAGCCACTGGAGCAA‑CCT‑CAAAAA‑‑CACCA‑TCAATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTGAAAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTg < 1:742632/180‑1 (MQ=38) aaaCAGAAGCCACTGGAGCAA‑CCT‑C‑AAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAgg < 1:742635/187‑1 (MQ=255) aaGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTCTTTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAgtg < 1:742637/245‑1 (MQ=255) gagcacctcaaaAAAAAA‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑c < 1:378967‑M1/42‑1 (MQ=255) gAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGGTC‑TGTATGCGTCAA‑CGTGAAACC‑GCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCGTTTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGACTAAAGCAGGCG‑CTGGAAGAGTGTTCCGGGTAAAAGACACTGAAGTGGTTGAACGACTgg > 1:742643/1‑273 (MQ=255) aGC‑A‑CCT‑C‑AAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAG‑TAA‑TCGATTC‑‑TTTTCGA‑TG‑TCTGG‑C‑TGTATGCGTCAACCGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGC‑GGCG‑CTGGAAGAGTGTTCC‑GGT‑AAAGACACTGAAGt > 1:742645/1‑250 (MQ=255) caAAAAA‑‑CACCA‑TC‑ATACAC‑TAAAATC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGtt < 1:27765‑M1/229‑1 (MQ=255) cAAAAC‑‑AACCA‑TC‑ATACAC‑TAAA‑TCTAG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGTCGCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCT‑GGGCTGGTGGAATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGaa > 1:742646/1‑224 (MQ=255) cAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCGTTTTTACCTACAGTTACCAGTTTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGTTCC‑GGTaaaa > 1:742648/1‑240 (MQ=255) cAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCGTTTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGTTCC‑GGTaaaa > 1:742647/1‑239 (MQ=255) | CCCATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGC‑GGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGC‑TT‑TTGCCGTTACGCACCA‑CCCCGTCAGTAGCT‑GAACAGGAGGGAC‑AGCTGATAG‑AAACAGAAGCCACTGGAGC‑A‑CCT‑CAAAAA‑‑CACCA‑TC‑ATACAC‑TAAA‑TC‑AG‑T‑AA‑‑GTTGGCAG‑CAT‑CACCTG‑AAGGT‑AAGT‑GCAAAGATAA‑TCGATTC‑TTTTTCGATTG‑TCTGG‑C‑TGTATGCGTCAA‑CGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGG‑ATGGAGCTGGAAGCGCAGGAATCCCG‑TTTTACCTACAGTTACCAG‑TTTGGTCTGTTCGA‑TAAAGCAGGCGACTGGAAGAGTGTTCC‑GGTAAAAGACACTGAAGTGGTTGAACGACTGG > NC_000913/258400‑258893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |