New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1873039	0 (0.000)	48 (0.770)	38/388	0.4	100%	coding (999/1491 nt)	dgcJ	putative diguanylate cyclase DgcJ
	?	NC_000913	1978503 =	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

ACAAAAACAATCTGCGGAATATCTTTTATACTCATGACCGCCCTCTCCTCTGGCG‑‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCG  >  NC_000913/1872762‑1873348                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                                      aCAAAAACAATCTGCGGAATATCTTTTATACTCATGACCGCCCTCTCCTCTGGCG‑‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTCTTTTACTTTATCACGTC‑TTCGTGGAAAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACgg                                                                                                                                                                                                                                                                                                                     >  1:1181205‑M1/1‑280 (MQ=255)       aCAATCTGCGGAATATC‑TTTATACTCATGACCGCCCTCTCCTCTGGCG‑‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTCTTTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                                                                                                                                                                                                                                >  1:353067‑M1/1‑272 (MQ=255)                      tCTTTTATACTCATGACCGCCCTCTCCTCTGGCGTTTTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtatgactccaacttatt                                                                                                                                                                                                                                                                                                    >  1:353068‑M1/1‑259 (MQ=255)                                              tcctctGGCG‑‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTCTTTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagt                                                                                                                                                                                                                                                                                             >  1:1181210‑M1/1‑234 (MQ=255)                                              tcctctGGCG‑‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttca                                                                                                                                                                                                                                                                                 <  1:1181207‑M1/271‑39 (MQ=255)                                                           tttCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTCTTTTACTTTATCACGTCTTTCGTGGAAAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttttgtca                                                                                                                                                                                                                                                         >  1:1181212‑M1/1‑225 (MQ=255)                                                                              ccgataccgatTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCC‑‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCGTTT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                                                                                                                                                                                                           >  1:1181215‑M1/1‑203 (MQ=255)                                                                               cgataccgatTCGGGGCGCGACATTATCATCAACCAGAGCAGAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCATTGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑‑TTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGA‑GGCG‑TT‑AA‑TTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                                                                                                                                                                                              <  1:353074‑M1/242‑42 (MQ=255)                                                                                   accgatTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                                                                                                                                                                                                                                 <  1:1181211‑M1/284‑87 (MQ=255)                                                                                     cgatTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                                                                                                                                                                                         <  1:1181213‑M1/258‑63 (MQ=255)                                                                                     cgatTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatg                                                                                                                                                                                                                                                                                     >  1:353075‑M1/1‑196 (MQ=255)                                                                                                     aTTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                                                                                                                                                                                          >  1:353076‑M1/1‑180 (MQ=255)                                                                                                               aCCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAGATTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TTAAATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttaattgatagtgttttatgttcagataatgccc                                                                                                                                                                                                                                                                      <  1:1181216‑M1/221‑50 (MQ=255)                                                                                                                         aaGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑‑TTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattcgtgcagctttcccttcaggcgggattcatacagcggccagcc                                                                                                >  1:353079‑M1/1‑160 (MQ=255)                                                                                                                            aTAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCATTTCGTGTCTCGTTATCCATTGATATTTCTTTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGATTTTTGACGGCG‑TT‑AATTTT‑GCTGAATA‑GGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttat                                                                                                                                                                               <  1:568738‑M1/297‑137 (MQ=255)                                                                                                                            aTAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCAgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                                                                                                                                                                                                <  1:742162‑M1/278‑121 (MQ=255)                                                                                                                                                         ccA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATATTTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgct                                                                                                                                               <  1:568735‑M1/299‑169 (MQ=255)                                                                                                                                                                 ttACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtttttatgttcagataatgc                                                                                                                                                                                                                                                                        <  1:353081‑M1/170‑48 (MQ=255)                                                                                                                                                                   aCCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                                                                                                                                                                                                       >  1:1181219‑M1/1‑121 (MQ=255)                                                                                                                                                                   aCCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑‑AAAGCG‑TTCGTGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccactgattttgagaacgtcagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtta                                                                                                                                                                               >  1:353083‑M1/1‑121 (MQ=255)                                                                                                                                                                           gcA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                                                                                                                                                                                              <  1:1181217‑M1/154‑42 (MQ=255)                                                                                                                                                                             a‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattcgtgcagctttcccttcaggcgggatcatacagcggccagcc                                                                                                 >  1:353084‑M1/1‑111 (MQ=255)                                                                                                                                                                                        cGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctc                                                                                                                                                                       <  1:1468505‑M1/245‑145 (MQ=255)                                                                                                                                                                                            aTCCATTGATA‑TTC‑TTTACTTTATCACGTCTTTCGTGG‑AAAAGCGTTTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcataca                                                                                                         >  1:30855‑M1/1‑99 (MQ=255)                                                                                                                                                                                            aTCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagc                                                                                                                                  >  1:1181221‑M1/1‑97 (MQ=255)                                                                                                                                                                                            aTCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑‑AAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTTAGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagatgaatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgtcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcg                                                                                                     >  1:30865‑M1/1‑97 (MQ=255)                                                                                                                                                                                                        ttC‑TTTACTTTATCACGTC‑TTCGTGG‑‑AAAGCG‑TTC‑TGTTCTGGA‑‑TTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                                                                                                                                                                                                                                     >  1:353085‑M1/1‑84 (MQ=255)                                                                                                                                                                                                         tC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgct                                                                                                                                                                        >  1:353086‑M1/1‑85 (MQ=255)                                                                                                                                                                                                          c‑tttactttaTCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagggtgacagcaggctca                                                    >  1:30866‑M1/1‑84 (MQ=255)                                                                                                                                                                                                               actttaTCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgctttgctgattacgtgcagctttcccttcaggcggga                                                                                                                 >  1:747064‑M1/1‑80 (MQ=255)                                                                                                                                                                                                                        cgtctttcgtggaAAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCGTTT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccactcaaaggtgacagcaggctcataagacgccccagcgtcgccatagtgcgttcaccgaatacgtgcgcaaca  >  1:568698‑M1/6‑74 (MQ=255)                                                                                                                                                                                                                              tCGTGG‑AAAAGCG‑TTC‑TGTTCTGGATTTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtttttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattca                                                                                                           <  1:568730‑M1/271‑205 (MQ=255)                                                                                                                                                                                                                                gTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagggtgacagcaggctcataagacgccccagcgtcgccatagtgcgttcaccgaatacgtgcg      >  1:2097‑M1/1‑64 (MQ=255)                                                                                                                                                                                                                                        aGCG‑TTC‑TGTTCTGGA‑‑TTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaactattgatagtgtttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatta                                                                                                                                             <  1:568733‑M1/226‑171 (MQ=255)                                                                                                                                                                                                                                                     ctgGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagcttttccctt                                                                                                                         >  1:2098‑M1/1‑46 (MQ=255)                                                                                                                                                                                                                                                      tcttggatttgaggcg‑tt‑aatttt‑gcTGAATA‑GGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatac                                                                                                           <  1:568729‑M1/237‑205 (MQ=255)                                                                                                                                                                                                                                                                     g‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaactattgatagtgtttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgccagctttcccttcaggcggggattcatacagcggccagccatcccgtcatccatatcaccacgtcaaagggtgacagcaggctcat                                                  <  1:568716‑M1/292‑262 (MQ=255)                                                                                                                                                                                                                                                                        taaattTT‑GCTGAATA‑GGTGCGGATGCAgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatta                                                                                                                                            <  1:742160‑M1/199‑173 (MQ=255)                                                                                                                                                                                                                                                                          aaTTTT‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccactcaaaagggtgacagcaggctca                                                   >  1:568711‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                                                                            tttt‑GCTGAATA‑GGTGCGGATGCACggtaatgactccaacttattgatagtgttttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                                                                                                                                                                                                                                   <  1:568743‑M1/109‑85 (MQ=255)                                                                                                                                                                                                                                                                              tt‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagggtgacagcag                                                        >  1:708290‑M1/1‑24 (MQ=255)                                                                                                                                                                                                                                                                              tt‑GCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccata                                                                                 >  1:708289‑M1/1‑24 (MQ=255)                                                                                                                                                                                                                                                                                    gAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                                                                                                                                                                                              <  1:568747‑M1/76‑58 (MQ=255)                                                                                                                                                                                                                                                                                       aatgGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                                                                                                                                                                                                      >  1:128803‑M1/2‑16 (MQ=255)                                                                                                                                                                                                                                                                                                gATGCACggtaatgactccaacttattgatagtgtttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctca                                                                                                                                                                                          <  1:128799‑M1/132‑126 (MQ=255)                                                                                                                                                                                                                                                                                                gATGCACggtaatgactccaactattgatagtgtttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatt                                                                                                                                            <  1:568734‑M1/178‑172 (MQ=255)                                                                                                                                                                                                                                                                                                   gCACggtaatgactccaacttattgatagtgttttt                                                                                                                                                                                                                                                                                       <  1:128815‑M1/36‑33 (MQ=255)                                                                                                                                                                                                                                                                                                      cggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt                                                                                                                                                                                 <  1:1468506‑M1/135‑135 (MQ=255)                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                                      ACAAAAACAATCTGCGGAATATCTTTTATACTCATGACCGCCCTCTCCTCTGGCG‑‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGC‑GAAGATAATCTGTTCCAGTATGTCAG‑TTACGTCCA‑TGACTTACCGGGCGGCA‑TTCGTGTCTCGTTATCCATTGATA‑TTC‑TTTACTTTATCACGTC‑TTCGTGG‑AAAAGCG‑TTC‑TGTTCTGGA‑TTTTGACGGCG‑TT‑AATTTT‑GCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCG  >  NC_000913/1872762‑1873348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.