Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,188,960	Δ9 bp	coding (3611‑3619/4224 nt)	rpoC →	RNA polymerase subunit beta'

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4188960	4188968	9	65 [0]	[0] 65	rpoC	RNA polymerase subunit beta'

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4188959	0 (0.000)	61 (1.020)	55/374	0.0	100%	coding (3610/4224 nt)	rpoC	RNA polymerase subunit beta'
	?	NC_000913	4188969 =	0 (0.000)					coding (3620/4224 nt)	rpoC	RNA polymerase subunit beta'

TAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACA‑CCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGG  >  NC_000913/4188658‑4189316                                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                                                                                      tAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACA‑CCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGT‑GTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CACCCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaac                                                                                                                                                                                                                                                                                 >  1:632758‑M1/1‑303 (MQ=255)                         tGGCGTACAGATCAGCTCTGGTGACA‑CCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGT‑GTCTGCCGCGCGTTGCGGACCTGGTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑‑AA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttca                                                                                                                                                                                                                                                                                                          >  1:632762‑M1/1‑277 (MQ=255)                                   aTCAGCTCTGGTGACACCCCTGGCGCGTATTCCGCAGG‑ATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgt                                                                                                                                                                                                                                                                                             <  1:632761‑M1/344‑75 (MQ=255)                                          ctGGTGACA‑CCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgc                                                                                                                                                                                                                                                                                                                          >  1:1554037‑M1/1‑261 (MQ=255)                                                        ggCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaattttccgacggtccggaagcgccgcacgcattctgcg                                                                                                                                                                                                                                                                                                                         >  1:1554039‑M1/1‑248 (MQ=255)                                                         gcgcGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccg                                                                                                                                                                                                                                                                                                                                                        >  1:1554040‑M1/1‑247 (MQ=255)                                                                       ggAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTG‑AATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgt                                                                                                                                                                                                                                                                                                    >  1:1554043‑M1/1‑232 (MQ=255)                                                                                          gACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgcgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttac                                                                                                                                                                                                                                                                                           <  1:1554041‑M1/292‑77 (MQ=255)                                                                                             aTCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacg                                                                                                                                                                                                                                                                                >  1:1554051‑M1/1‑211 (MQ=255)                                                                                                aCCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTTAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CACCCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaattttccgacggtccggaagcgccgcacgcatttctgcgt                                                                                                                                                                                                                                                                                                                       >  1:1554053‑M1/1‑210 (MQ=255)                                                                                                    gtggtCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTG‑ACGTGgtgacgtaatttccgacggtccggaagcgcgcacgcattctgcgtctgcgtgtgttcatgctgttactcgttacatcgttaacg                                                                                                                                                                                                                                                                                   >  1:1554055‑M1/1‑203 (MQ=255)                                                                                                      ggtCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtgg                                                                                                                                                                                                                                                                                                                <  1:1554045‑M1/259‑56 (MQ=255)                                                                                                      ggtCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttcatcg                                                                                                                                                                                                                                                                                       >  1:632768‑M1/1‑203 (MQ=255)                                                                                                            ccGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaattccgacggtccggaagcgccgcacgacattctgcgtc                                                                                                                                                                                                                                                                                                                        >  1:1554059‑M1/1‑196 (MQ=255)                                                                                                                   ttGCGGA‑CT‑GTTCGAAGCACCGTCGTCCG‑AAAGAGCCGGCAATCC‑GGCTG‑AATCAGCGGTATCG‑TTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACG‑CGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑‑ACGTGTTCGAAGGTGAACGTGgtgacg                                                                                                                                                                                                                                                                                                                                                                 <  1:1554048‑M1/190‑7 (MQ=255)                                                                                                                     gCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaattccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttctgctgttactcgttacatcgttaacgaagtacaggtacgtatacctgtctgccagggcgttaag                                                                                                                                                                                                                                            >  1:1554062‑M1/1‑187 (MQ=255)                                                                                                                     gCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑‑ACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgtcacgatcattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggactataccgtctgcagggcg                                                                                                                                                                                                                                                 >  1:1554061‑M1/1‑186 (MQ=255)                                                                                                                     gCGGACCT‑GTTCG‑AGCA‑CGTCGTCCGAAAAGAGCCGGCAATCCTGGCTG‑AATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgt                                                                                                                                                                                                                                                                                                                                                                <  1:1554049‑M1/193‑8 (MQ=255)                                                                                                                       ggACCT‑GTTCGAAGCA‑CG‑CGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAAGGG‑TAAAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctg                                                                                                                                                                                                                                                         <  1:632766‑M1/296‑111 (MQ=255)                                                                                                                          ccT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTATCCA‑CCCCGGTAGACGGTAGCG‑TCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgt                                                                                                                                                                                                                                                                                                             >  1:1554064‑M1/1‑182 (MQ=255)                                                                                                                                 cGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacgg                                                                                                                                                                                                                                                                                                                                                    >  1:632770‑M1/1‑177 (MQ=255)                                                                                                                                 cGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcaggggcgttaagattaacgataaa                                                                                                                                                                                                                                >  1:632771‑M1/1‑176 (MQ=255)                                                                                                                                 cGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgt                                                                                                                                                                                                                                                                                                                                                                >  1:1554066‑M1/1‑176 (MQ=255)                                                                                                                                              tcCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACCAAAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgcgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaa                                                                                                                                                                                                                                         <  1:1554060‑M1/291‑127 (MQ=255)                                                                                                                                               ccG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagta                                                                                                                                                                                                                                                                           >  1:1554067‑M1/1‑163 (MQ=255)                                                                                                                                                cG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgc                                                                                                                                                                                                                                                                                                                                         <  1:1554063‑M1/192‑31 (MQ=255)                                                                                                                                                   aaaGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑TAAAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagat                                                                                                                                                                                                       <  1:632769‑M1/321‑161 (MQ=255)                                                                                                                                                        gCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacagg                                                                                                                                                                                                                                                                       >  1:1554069‑M1/1‑155 (MQ=255)                                                                                                                                                         ccGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTCAAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgtt                                                                                                                                                                                                                                                                                    <  1:632773‑M1/238‑84 (MQ=255)                                                                                                                                                                 ccTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctg                                                                                                                                                                                                                                                                                                     >  1:632777‑M1/1‑146 (MQ=255)                                                                                                                                                                  cTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaatgcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactc                                                                                                                                                                                                                                                                                              >  1:1554071‑M1/1‑145 (MQ=255)                                                                                                                                                                  cTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaa                                                                                                                                                                                                                                                                                  >  1:1554072‑M1/1‑145 (MQ=255)                                                                                                                                                                            tCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtt                                                                                                                                                                                                                                                <  1:1554068‑M1/254‑120 (MQ=255)                                                                                                                                                                                    aTCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554076‑M1/1‑127 (MQ=255)                                                                                                                                                                                    aTCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554074‑M1/1‑127 (MQ=255)                                                                                                                                                                                    aTCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554075‑M1/1‑127 (MQ=255)                                                                                                                                                                                       gTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑‑ACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554077‑M1/1‑123 (MQ=255)                                                                                                                                                                                           ccTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctac                                                                                                                                                                                        >  1:1554078‑M1/1‑120 (MQ=255)                                                                                                                                                                                              tCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataacacatcgaagttatcgttcgtcagatgctgcgtaaa                                                                                                                                                                                              >  1:632784‑M1/1‑117 (MQ=255)                                                                                                                                                                                               cGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacga                                                                                                                                                                                                                                                                               >  1:632785‑M1/1‑116 (MQ=255)                                                                                                                                                                                                   tAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaattttccgacggtccggaagcgccgcacgcattctgcgtctgcgtggtgttcatgctgtta                                                                                                                                                                                                                                                                                                  >  1:1554079‑M1/1‑113 (MQ=255)                                                                                                                                                                                                     aaGAAACC‑AAA‑GGAA‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAA‑GGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctgg                                                                                                                                                       <  1:632780‑M1/319‑209 (MQ=255)                                                                                                                                                                                                         aaccaaaa‑gg‑t‑aaACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑‑ACGTGTTCGAAGGTG‑ACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccat                                                                                                                                                                                     <  1:1554073‑M1/279‑179 (MQ=255)                                                                                                                                                                                                               aa‑GG‑TAAAACGTCGTCTGG‑TAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaaacacatcgaagttatcgttcgtca                                                                                                                                                                                                         <  1:632781‑M1/260‑159 (MQ=255)                                                                                                                                                                                                                   gtaaaaacgtcGTCTGG‑TAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAA‑GGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaat                                                                                                                                      <  1:632783‑M1/320‑226 (MQ=255)                                                                                                                                                                                                                                 tGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgtctcgtaaagctaccatcgttaacgcgggtagctcc                                                                                                                                                                  >  1:1554080‑M1/1‑87 (MQ=255)                                                                                                                                                                                                                                      aT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaattccgtacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctcc                                                                                                                                                                 >  1:1554082‑M1/1‑82 (MQ=255)                                                                                                                                                                                                                                                             gATCCGTACGAAGAGGATGATTCCGGAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgtcgtctgcgtg                                                                                                                                                                                                                                                                                                                >  1:1554084‑M1/1‑63 (MQ=255)                                                                                                                                                                                                                                                                 cGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcaga                                                                                                                                                                                                        <  1:1554083‑M1/216‑160 (MQ=255)                                                                                                                                                                                                                                                                               gatTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcg                                                                                                                                                                                                 >  1:1554087‑M1/1‑44 (MQ=255)                                                                                                                                                                                                                                                                                atTCC‑GAAATGGCGTCAGCTCAAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactgg                                                                                                     <  1:632786‑M1/302‑259 (MQ=255)                                                                                                                                                                                                                                                                                    c‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaagctaccatcgttacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaaagtgggtgcaacttactcccgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatctccgcggcatcgttccag  <  1:632787‑M1/396‑358 (MQ=255)                                                                                                                                                                                                                                                                                                cAGCTC‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcg                                                                                                                                                                                                 <  1:1554085‑M1/194‑167 (MQ=255)                                                                                                                                                                                                                                                                                                     c‑AACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtaagattaacgataaaacacatcgaaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaaagtgggtgcaacttactcccgcgatctgctgggtatcaccaaagcgtctctggcaccgagtccttcatctcc               >  1:632790‑M1/1‑23 (MQ=255)                                                                                                                                                                                                                                                                                                         cGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcg                                                                                                           <  1:1554086‑M1/272‑253 (MQ=255)                                                                                                                                                                                                                                                                                                          gtgtTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcga                                                                                                                                                  <  1:632789‑M1/232‑214 (MQ=255)                                                                                                                                                                                                                                                                                                          gtgtTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaa                                                                                                                                                <  1:632788‑M1/234‑216 (MQ=255)                                                                                                                                                                                                                                                                                                             ttCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaaagtgggtgcaac                                                                              >  1:632791‑M1/1‑16 (MQ=255)                                                                                                                                                                                                                                                                                                              tCGAAGGTG‑ACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggc                                                                                          <  1:1554094‑M1/283‑270 (MQ=255)                                                                                                                                                                                                                                                                                                               cGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctc                                                                                                                                >  1:1554089‑M1/1‑14 (MQ=255)                                                                                                                                                                                                                                                                                                                 aaGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggc                                                                                                                                                   <  1:1554088‑M1/224‑213 (MQ=255)                                                                                                                                                                                                                                                                                                                       aaCGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaa                                                                                        <  1:1554090‑M1/277‑272 (MQ=255)                                                                                                                                                                                                                                                                                                                       aaCGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtc                                                                                                                           <  1:1554091‑M1/242‑237 (MQ=255)                                                                                                                                                                                                                                                                                                                           tggtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaag                                                                                                  >  1:1554093‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                                                           tggtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaa                                                                                                                          >  1:632792‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                                                                                      TAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACA‑CCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCT‑GTTCGAAGCA‑CGTCGTCCG‑AAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG‑TAAAGAAACC‑AAA‑GG‑T‑AAACGTCGTCTGGTTAT‑CA‑CCCCGGTAGACGGTAGCGATCCGTACGAAGA‑GATGATTCC‑GAAATGGCGTCAGCTC‑AACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGG  >  NC_000913/4188658‑4189316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.