Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,188,960 Δ9 bp coding (3611‑3619/4224 nt) rpoC → RNA polymerase subunit beta'

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4188960 4188968 9 65 [0] [0] 65 rpoC RNA polymerase subunit beta'

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41889590 (0.000)61 (1.020) 55/374 0.0 100% coding (3610/4224 nt) rpoC RNA polymerase subunit beta'
?NC_000913 4188969 = 0 (0.000)coding (3620/4224 nt) rpoC RNA polymerase subunit beta'

TAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGG  >  NC_000913/4188658‑4189316
                                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                                                                                     
tAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaac                                                                                                                                                                                                                                                                                 >  1:632758‑M1/1‑303 (MQ=255)
                        tGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGTCTGCCGCGCGTTGCGGACCTGGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttca                                                                                                                                                                                                                                                                                                          >  1:632762‑M1/1‑277 (MQ=255)
                                  aTCAGCTCTGGTGACACCCCTGGCGCGTATTCCGCAGGATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgt                                                                                                                                                                                                                                                                                             <  1:632761‑M1/344‑75 (MQ=255)
                                         ctGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgc                                                                                                                                                                                                                                                                                                                          >  1:1554037‑M1/1‑261 (MQ=255)
                                                       ggCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattttccgacggtccggaagcgccgcacgcattctgcg                                                                                                                                                                                                                                                                                                                         >  1:1554039‑M1/1‑248 (MQ=255)
                                                        gcgcGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccg                                                                                                                                                                                                                                                                                                                                                        >  1:1554040‑M1/1‑247 (MQ=255)
                                                                      ggAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgt                                                                                                                                                                                                                                                                                                    >  1:1554043‑M1/1‑232 (MQ=255)
                                                                                         gACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgcgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttac                                                                                                                                                                                                                                                                                           <  1:1554041‑M1/292‑77 (MQ=255)
                                                                                            aTCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacg                                                                                                                                                                                                                                                                                >  1:1554051‑M1/1‑211 (MQ=255)
                                                                                               aCCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattttccgacggtccggaagcgccgcacgcatttctgcgt                                                                                                                                                                                                                                                                                                                       >  1:1554053‑M1/1‑210 (MQ=255)
                                                                                                   gtggtCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGACGTGgtgacgtaatttccgacggtccggaagcgcgcacgcattctgcgtctgcgtgtgttcatgctgttactcgttacatcgttaacg                                                                                                                                                                                                                                                                                   >  1:1554055‑M1/1‑203 (MQ=255)
                                                                                                     ggtCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtgg                                                                                                                                                                                                                                                                                                                <  1:1554045‑M1/259‑56 (MQ=255)
                                                                                                     ggtCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttcatcg                                                                                                                                                                                                                                                                                       >  1:632768‑M1/1‑203 (MQ=255)
                                                                                                           ccGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattccgacggtccggaagcgccgcacgacattctgcgtc                                                                                                                                                                                                                                                                                                                        >  1:1554059‑M1/1‑196 (MQ=255)
                                                                                                                  ttGCGGACTGTTCGAAGCACCGTCGTCCGAAAGAGCCGGCAATCCGGCTGAATCAGCGGTATCGTTCCTTCGGTAAAGAAACCAAAGGTAAACGCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCACGTGTTCGAAGGTGAACGTGgtgacg                                                                                                                                                                                                                                                                                                                                                                 <  1:1554048‑M1/190‑7 (MQ=255)
                                                                                                                    gCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttctgctgttactcgttacatcgttaacgaagtacaggtacgtatacctgtctgccagggcgttaag                                                                                                                                                                                                                                            >  1:1554062‑M1/1‑187 (MQ=255)
                                                                                                                    gCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgtcacgatcattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggactataccgtctgcagggcg                                                                                                                                                                                                                                                 >  1:1554061‑M1/1‑186 (MQ=255)
                                                                                                                    gCGGACCTGTTCGAGCACGTCGTCCGAAAAGAGCCGGCAATCCTGGCTGAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgt                                                                                                                                                                                                                                                                                                                                                                <  1:1554049‑M1/193‑8 (MQ=255)
                                                                                                                      ggACCTGTTCGAAGCACGCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGGTAAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctg                                                                                                                                                                                                                                                         <  1:632766‑M1/296‑111 (MQ=255)
                                                                                                                         ccTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCCACCCCGGTAGACGGTAGCGTCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgt                                                                                                                                                                                                                                                                                                             >  1:1554064‑M1/1‑182 (MQ=255)
                                                                                                                                cGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacgg                                                                                                                                                                                                                                                                                                                                                    >  1:632770‑M1/1‑177 (MQ=255)
                                                                                                                                cGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcaggggcgttaagattaacgataaa                                                                                                                                                                                                                                >  1:632771‑M1/1‑176 (MQ=255)
                                                                                                                                cGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgt                                                                                                                                                                                                                                                                                                                                                                >  1:1554066‑M1/1‑176 (MQ=255)
                                                                                                                                             tcCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgcgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaa                                                                                                                                                                                                                                         <  1:1554060‑M1/291‑127 (MQ=255)
                                                                                                                                              ccGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagta                                                                                                                                                                                                                                                                           >  1:1554067‑M1/1‑163 (MQ=255)
                                                                                                                                               cGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgc                                                                                                                                                                                                                                                                                                                                         <  1:1554063‑M1/192‑31 (MQ=255)
                                                                                                                                                  aaaGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagat                                                                                                                                                                                                       <  1:632769‑M1/321‑161 (MQ=255)
                                                                                                                                                       gCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacagg                                                                                                                                                                                                                                                                       >  1:1554069‑M1/1‑155 (MQ=255)
                                                                                                                                                        ccGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgtt                                                                                                                                                                                                                                                                                    <  1:632773‑M1/238‑84 (MQ=255)
                                                                                                                                                                ccTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctg                                                                                                                                                                                                                                                                                                     >  1:632777‑M1/1‑146 (MQ=255)
                                                                                                                                                                 cTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaatgcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactc                                                                                                                                                                                                                                                                                              >  1:1554071‑M1/1‑145 (MQ=255)
                                                                                                                                                                 cTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaa                                                                                                                                                                                                                                                                                  >  1:1554072‑M1/1‑145 (MQ=255)
                                                                                                                                                                           tCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtt                                                                                                                                                                                                                                                <  1:1554068‑M1/254‑120 (MQ=255)
                                                                                                                                                                                   aTCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554076‑M1/1‑127 (MQ=255)
                                                                                                                                                                                   aTCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554074‑M1/1‑127 (MQ=255)
                                                                                                                                                                                   aTCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554075‑M1/1‑127 (MQ=255)
                                                                                                                                                                                      gTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCACGTGTTCGAAGGTGAACGTGgtgacgtaatttcc                                                                                                                                                                                                                                                                                                                                                         >  1:1554077‑M1/1‑123 (MQ=255)
                                                                                                                                                                                          ccTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctac                                                                                                                                                                                        >  1:1554078‑M1/1‑120 (MQ=255)
                                                                                                                                                                                             tCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataacacatcgaagttatcgttcgtcagatgctgcgtaaa                                                                                                                                                                                              >  1:632784‑M1/1‑117 (MQ=255)
                                                                                                                                                                                              cGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacga                                                                                                                                                                                                                                                                               >  1:632785‑M1/1‑116 (MQ=255)
                                                                                                                                                                                                  tAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattttccgacggtccggaagcgccgcacgcattctgcgtctgcgtggtgttcatgctgtta                                                                                                                                                                                                                                                                                                  >  1:1554079‑M1/1‑113 (MQ=255)
                                                                                                                                                                                                    aaGAAACCAAAGGAAAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAAGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctgg                                                                                                                                                       <  1:632780‑M1/319‑209 (MQ=255)
                                                                                                                                                                                                        aaccaaaaggtaaACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCACGTGTTCGAAGGTGACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccat                                                                                                                                                                                     <  1:1554073‑M1/279‑179 (MQ=255)
                                                                                                                                                                                                              aaGGTAAAACGTCGTCTGGTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaaacacatcgaagttatcgttcgtca                                                                                                                                                                                                         <  1:632781‑M1/260‑159 (MQ=255)
                                                                                                                                                                                                                  gtaaaaacgtcGTCTGGTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAAGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaat                                                                                                                                      <  1:632783‑M1/320‑226 (MQ=255)
                                                                                                                                                                                                                                tGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgtctcgtaaagctaccatcgttaacgcgggtagctcc                                                                                                                                                                  >  1:1554080‑M1/1‑87 (MQ=255)
                                                                                                                                                                                                                                     aTCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaattccgtacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctcc                                                                                                                                                                 >  1:1554082‑M1/1‑82 (MQ=255)
                                                                                                                                                                                                                                                            gATCCGTACGAAGAGGATGATTCCGGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgtcgtctgcgtg                                                                                                                                                                                                                                                                                                                >  1:1554084‑M1/1‑63 (MQ=255)
                                                                                                                                                                                                                                                                cGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcaga                                                                                                                                                                                                        <  1:1554083‑M1/216‑160 (MQ=255)
                                                                                                                                                                                                                                                                              gatTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcg                                                                                                                                                                                                 >  1:1554087‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                                                                                               atTCCGAAATGGCGTCAGCTCAAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactgg                                                                                                     <  1:632786‑M1/302‑259 (MQ=255)
                                                                                                                                                                                                                                                                                   cGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaagctaccatcgttacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaaagtgggtgcaacttactcccgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatctccgcggcatcgttccag  <  1:632787‑M1/396‑358 (MQ=255)
                                                                                                                                                                                                                                                                                               cAGCTCAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcg                                                                                                                                                                                                 <  1:1554085‑M1/194‑167 (MQ=255)
                                                                                                                                                                                                                                                                                                    cAACGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtaagattaacgataaaacacatcgaaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaaagtgggtgcaacttactcccgcgatctgctgggtatcaccaaagcgtctctggcaccgagtccttcatctcc               >  1:632790‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                                                                                                        cGTGTTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcg                                                                                                           <  1:1554086‑M1/272‑253 (MQ=255)
                                                                                                                                                                                                                                                                                                         gtgtTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcga                                                                                                                                                  <  1:632789‑M1/232‑214 (MQ=255)
                                                                                                                                                                                                                                                                                                         gtgtTCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaa                                                                                                                                                <  1:632788‑M1/234‑216 (MQ=255)
                                                                                                                                                                                                                                                                                                            ttCGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaaagtgggtgcaac                                                                              >  1:632791‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                                                                                             tCGAAGGTGACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggc                                                                                          <  1:1554094‑M1/283‑270 (MQ=255)
                                                                                                                                                                                                                                                                                                              cGAAGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctc                                                                                                                                >  1:1554089‑M1/1‑14 (MQ=255)
                                                                                                                                                                                                                                                                                                                aaGGTGAACGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggc                                                                                                                                                   <  1:1554088‑M1/224‑213 (MQ=255)
                                                                                                                                                                                                                                                                                                                      aaCGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaagcgaacggcaa                                                                                        <  1:1554090‑M1/277‑272 (MQ=255)
                                                                                                                                                                                                                                                                                                                      aaCGTGgtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtc                                                                                                                           <  1:1554091‑M1/242‑237 (MQ=255)
                                                                                                                                                                                                                                                                                                                          tggtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaagatcgcaaaccgcgaactggaag                                                                                                  >  1:1554093‑M1/1‑2 (MQ=255)
                                                                                                                                                                                                                                                                                                                          tggtgacgtaatttccgacggtccggaagcgccgcacgacattctgcgtctgcgtggtgttcatgctgttactcgttacatcgttaacgaagtacaggacgtataccgtctgcagggcgtaagattaacgataaacacatcgaagttatcgttcgtcagatgctgcgtaaagctaccatcgttaacgcgggtagctccgacttcctggaaggcgaacaggttgaatactctcgcgtcaa                                                                                                                          >  1:632792‑M1/1‑2 (MQ=255)
                                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                                                                                     
TAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGG  >  NC_000913/4188658‑4189316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.