Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,188,960 Δ9 bp coding (3611‑3619/4224 nt) rpoC → RNA polymerase subunit beta'

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4188960 4188968 9 65 [0] [0] 65 rpoC RNA polymerase subunit beta'

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 41889590 (0.000)61 (1.020) 55/374 0.0 100% coding (3610/4224 nt) rpoC RNA polymerase subunit beta'
?NC_000913 4188969 = 0 (0.000)coding (3620/4224 nt) rpoC RNA polymerase subunit beta'

TTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGGCATCGTTCCAG  >  NC_000913/4188666‑4189327
                                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                                                                                   
taaagcgattgttcagctggaagatggcgtacagatcagctctggtgacaccctggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtgtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcacccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAAc                                                                                                                                                                                                                                                                                          >  1:632758‑M2/304‑389 (MQ=255)
                          tggcgtacagatcagctctggtgacaccctggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtgtctgccgcgcgttgcggacctggttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCa                                                                                                                                                                                                                                                                                                                    >  1:632762‑M2/278‑338 (MQ=255)
                                 atcagctctggtgacacccctggcgcgtattccgcaggatccggcggtaccaaggacatcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGt                                                                                                                                                                                                                                                                                                       <  1:632761‑M2/74‑1 (MQ=255)
                                          ctggtgacaccctggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATtctgc                                                                                                                                                                                                                                                                                                                                    >  1:1554037‑M2/262‑306 (MQ=255)
                                                       ggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTTCCGACGGTCCGGAAGCGCCGCACGCATtctgcg                                                                                                                                                                                                                                                                                                                                   >  1:1554039‑M2/249‑294 (MQ=255)
                                                        gcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCg                                                                                                                                                                                                                                                                                                                                                                      >  1:1554040‑M2/248‑262 (MQ=255)
                                                                       ggaatccggcggtaccaaggacatcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGt                                                                                                                                                                                                                                                                                                              >  1:1554043‑M2/233‑299 (MQ=255)
                                                                                       gacatcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTAc                                                                                                                                                                                                                                                                                                    <  1:1554041‑M2/76‑1 (MQ=255)
                                                                                            atcaccggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACg                                                                                                                                                                                                                                                                                         >  1:1554051‑M2/212‑298 (MQ=255)
                                                                                             accggtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggttaaagaaaccaaaggtaaacgtcgtctggttatcacccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTTCCGACGGTCCGGAAGCGCCGCACGCATTtctgcgt                                                                                                                                                                                                                                                                                                                                  >  1:1554053‑M2/211‑258 (MQ=255)
                                                                                                   ggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCgtgg                                                                                                                                                                                                                                                                                                                          <  1:1554045‑M2/55‑1 (MQ=255)
                                                                                                    gtggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCGCACGCATTCTGCGTCTGCGTGTGTTCATGCTGTTACTCGTTACATCGTTAACg                                                                                                                                                                                                                                                                                         >  1:1554055‑M2/204‑287 (MQ=255)
                                                                                                    ggtctgccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTCATCg                                                                                                                                                                                                                                                                                                >  1:632768‑M2/204‑283 (MQ=255)
                                                                                                           ccgcgcgttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTCCGACGGTCCGGAAGCGCCGCACGACATtctgcgtc                                                                                                                                                                                                                                                                                                                                 >  1:1554059‑M2/197‑243 (MQ=255)
                                                                                                                    gcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCTGCTGTTACTCGTTACATCGTTAACGAAGTACAGGTACGTATACCTGTCTGCCAGGGCGTTAAg                                                                                                                                                                                                                                                 >  1:1554062‑M2/188‑310 (MQ=255)
                                                                                                                     ggacctgttcgaagcacgcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaagggtaaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTg                                                                                                                                                                                                                                                               <  1:632766‑M2/110‑1 (MQ=255)
                                                                                                                     gcggacctgttcgagcacgtcgtccgaaaagagccggcaatcctggctgaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGt                                                                                                                                                                                                                                                                                                                                                                               <  1:1554049‑M2/7‑1 (MQ=255)
                                                                                                                     gcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGTCACGATCATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACTATACCGTCTGCAGGGCg                                                                                                                                                                                                                                                      >  1:1554061‑M2/187‑304 (MQ=255)
                                                                                                                       ttgcggactgttcgaagcaccgtcgtccgaaagagccggcaatccggctgaatcagcggtatcgttccttcggtaaagaaaccaaaggtaaacgcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcacgtgttcgaaggtgaacgtgGTGACg                                                                                                                                                                                                                                                                                                                                                                                <  1:1554048‑M2/6‑1 (MQ=255)
                                                                                                                         cctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatccaccccggtagacggtagcgtccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGgtgt                                                                                                                                                                                                                                                                                                                       >  1:1554064‑M2/183‑240 (MQ=255)
                                                                                                                              cgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACgg                                                                                                                                                                                                                                                                                                                                                                  >  1:632770‑M2/178‑196 (MQ=255)
                                                                                                                               cgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGt                                                                                                                                                                                                                                                                                                                                                                               >  1:1554066‑M2/177‑183 (MQ=255)
                                                                                                                               cgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGGCGTTAAGATTAACGATaaa                                                                                                                                                                                                                                    >  1:632771‑M2/177‑311 (MQ=255)
                                                                                                                                          tccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTaa                                                                                                                                                                                                                                            <  1:1554060‑M2/126‑1 (MQ=255)
                                                                                                                                            ccgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTa                                                                                                                                                                                                                                                                                   >  1:1554067‑M2/164‑255 (MQ=255)
                                                                                                                                             cgaaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAgcgc                                                                                                                                                                                                                                                                                                                                                      <  1:1554063‑M2/30‑1 (MQ=255)
                                                                                                                                              aaagagccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGAt                                                                                                                                                                                                         <  1:632769‑M2/160‑1 (MQ=255)
                                                                                                                                                    gccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAgg                                                                                                                                                                                                                                                                               >  1:1554069‑M2/156‑251 (MQ=255)
                                                                                                                                                    ccggcaatcctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGtt                                                                                                                                                                                                                                                                                              <  1:632773‑M2/83‑1 (MQ=255)
                                                                                                                                                             cctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTg                                                                                                                                                                                                                                                                                                               >  1:632777‑M2/147‑212 (MQ=255)
                                                                                                                                                              ctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAATGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTc                                                                                                                                                                                                                                                                                                         >  1:1554071‑M2/146‑218 (MQ=255)
                                                                                                                                                              ctggctgaaatcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTaa                                                                                                                                                                                                                                                                                           >  1:1554072‑M2/146‑230 (MQ=255)
                                                                                                                                                                        tcagcggtatcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGtt                                                                                                                                                                                                                                                    <  1:1554068‑M2/119‑1 (MQ=255)
                                                                                                                                                                                atcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTcc                                                                                                                                                                                                                                                                                                                                                                       >  1:1554076‑M2/128‑141 (MQ=255)
                                                                                                                                                                                atcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTcc                                                                                                                                                                                                                                                                                                                                                                       >  1:1554074‑M2/128‑141 (MQ=255)
                                                                                                                                                                                atcgtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTcc                                                                                                                                                                                                                                                                                                                                                                       >  1:1554075‑M2/128‑141 (MQ=255)
                                                                                                                                                                                    gtttccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcacgtgttcgaaggtgaacgtgGTGACGTAATTTcc                                                                                                                                                                                                                                                                                                                                                                       >  1:1554077‑M2/124‑137 (MQ=255)
                                                                                                                                                                                       ccttcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTAc                                                                                                                                                                                          >  1:1554078‑M2/121‑295 (MQ=255)
                                                                                                                                                                                          tcggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTaaa                                                                                                                                                                                               >  1:632784‑M2/118‑286 (MQ=255)
                                                                                                                                                                                           cggtaaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGa                                                                                                                                                                                                                                                                                       >  1:632785‑M2/117‑204 (MQ=255)
                                                                                                                                                                                              taaagaaaccaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTTCCGACGGTCCGGAAGCGCCGCACGCATTCTGCGTCTGCGTGGTGTTCATGCTGTTa                                                                                                                                                                                                                                                                                                            >  1:1554079‑M2/114‑182 (MQ=255)
                                                                                                                                                                                                aagaaaccaaaggaaaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaaggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTgg                                                                                                                                                          <  1:632780‑M2/208‑1 (MQ=255)
                                                                                                                                                                                                     aaccaaaaggtaaacgtcgtctggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcacgtgttcgaaggtgacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCAt                                                                                                                                                                                       <  1:1554073‑M2/178‑1 (MQ=255)
                                                                                                                                                                                                         aaggtaaaacgtcgtctggtatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAAACACATCGAAGTTATCGTTCGTCa                                                                                                                                                                                                            <  1:632781‑M2/158‑1 (MQ=255)
                                                                                                                                                                                                            gtaaaaacgtcgtctggtatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaaggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAAt                                                                                                                                        <  1:632783‑M2/225‑1 (MQ=255)
                                                                                                                                                                                                                        tggttatcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGTCTCGTAAAGCTACCATCGTTAACGCGGGTAGCTcc                                                                                                                                                                    >  1:1554080‑M2/88‑284 (MQ=255)
                                                                                                                                                                                                                             atcaccccggtagacggtagcgatccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTCCGTACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTcc                                                                                                                                                                    >  1:1554082‑M2/83‑280 (MQ=255)
                                                                                                                                                                                                                                                gatccgtacgaagaggatgattccggaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGTCGTCTGCgtg                                                                                                                                                                                                                                                                                                                           >  1:1554084‑M2/64‑118 (MQ=255)
                                                                                                                                                                                                                                                      cgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGa                                                                                                                                                                                                          <  1:1554083‑M2/159‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gattccgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCg                                                                                                                                                                                                   >  1:1554087‑M2/45‑210 (MQ=255)
                                                                                                                                                                                                                                                                   attccgaaatggcgtcagctcaaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTgg                                                                                                       <  1:632786‑M2/258‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cgaaatggcgtcagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAGCTACCATCGTTACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGGCATCGTTCCAg  <  1:632787‑M2/357‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   cagctcaacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCg                                                                                                                                                                                                   <  1:1554085‑M2/166‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        caacgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTAAGATTAACGATAAAACACATCGAAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCACCGAGTCCTTCATCTcc                 >  1:632790‑M2/24‑367 (MQ=255)
                                                                                                                                                                                                                                                                                           cgtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACcgcg                                                                                                             <  1:1554086‑M2/252‑1 (MQ=255)
                                                                                                                                                                                                                                                                                            gtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGaa                                                                                                                                                  <  1:632788‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                                                                                            gtgttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGa                                                                                                                                                   <  1:632789‑M2/213‑1 (MQ=255)
                                                                                                                                                                                                                                                                                               ttcgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAAc                                                                              >  1:632791‑M2/17‑297 (MQ=255)
                                                                                                                                                                                                                                                                                                 tcgaaggtgacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGc                                                                                            <  1:1554094‑M2/269‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                 cgaaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACtctc                                                                                                                                  >  1:1554089‑M2/15‑245 (MQ=255)
                                                                                                                                                                                                                                                                                                   aaggtgaacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGc                                                                                                                                                     <  1:1554088‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                         aacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTc                                                                                                                             <  1:1554091‑M2/236‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                         aacgtgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCaa                                                                                          <  1:1554090‑M2/271‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                             tgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAg                                                                                                    >  1:1554093‑M2/3‑263 (MQ=255)
                                                                                                                                                                                                                                                                                                             tgGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCaa                                                                                                                           >  1:632792‑M2/3‑239 (MQ=255)
                                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                                                                                   
TTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGGCATCGTTCCAG  >  NC_000913/4188666‑4189327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: