| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1207805 | 17 (0.370) | 38 (0.910) | 32/342 | 0.3 | 69.4% | coding (305/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | = 1209602 | 18 (0.430) | pseudogene (54/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||
GTATAGACACGAAAACCGCGCAGAAGGAT‑AAGTTCGGCGCGGGTAAGAA‑CGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1207508‑1207805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tt‑gg‑ttt‑ggg‑agaaggCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGGCT‑GGGATGAC‑GGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGTATGCAACGGAGGATCATGCTCATGGATTACCGTCAAGATCCACGATTGTGACTGATGCAACG < NC_000913/1209602‑1209320 GTATAGACACGAAAACCGCGCAGAAGGAT‑AAGTTCGGCGCGGGTAAGAA‑CGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAG‑ATCCG‑TTT‑GCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CAT > 1:89123/1‑304 ACACGAAAACCGCGCAGAAGGATAAAGTTCGGCGCGGGTAAGAACCGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCT‑GATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGCAAAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG < 1:89122/288‑1 CAGAAGGAT‑AAGTTCGGCGCGGGTAAGAA‑CGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGC‑AGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGG > 1:978187/1‑303 AGAAGGAT‑AAGTTCGGCGCGGGTAAGAA‑CGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCATCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATT < 1:502883/287‑1 T‑AAGTTCGGCGCGGGTAAGAA‑CGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAACTTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCGTTTTGGCGATATCAAATCGGATCGGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT > 1:502884/1‑295 AACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAACTTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑‑TT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CC > 1:502887/1‑256 AGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑C > 1:89127/1‑248 CGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑‑TTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑‑TTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGG > 1:502888/1‑247 CGCCTGCCACCGATCT‑GATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAG < 1:1019810/311‑1 CTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑‑TTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTT‑GCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGG > 1:1063057/1‑230 CACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCAT‑CGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTG < 1:1141963/301‑1 ATGATGACTAC‑TTTGACATGTTGCAGGAGGAACTTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CC > 1:502890/1‑224 TGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG < 1:89128/262‑1 TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑T > 1:502892/1‑177 TTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGTC‑CCCGGTTCCG‑TGGC > 1:89129/1‑223 GCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑‑TTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAG > 1:502894/1‑176 GAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑A < 1:89131/235‑1 GCCTGGAGAA‑GGGCGGC‑ACGACCAGTTACTTACCGCACTTCGTCGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATC‑AATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGGAAGAAGGCTCTG‑CATTACCTGTTGGTGTC‑CCCGGTTCCG‑TGGCC‑TTCAGCCAACTCCGCC‑AACAGGCTGGCTGAAAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCA < 1:503120/251‑1 TGGAGAAGGGGCGGCGACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGTC‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAA < 1:503118/267‑1 AAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGC < 1:502896/170‑1 C‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑A < 1:503123/184‑1 ACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCGTTTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTAT > 1:502899/1‑269 CGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTTGGG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTG < 1:1166945/195‑1 CTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑‑AACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGTC‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTGAAAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATACCCCGGAACTGGC‑AAGGCTTAT‑CCG‑ACAAAT‑AATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGGCT‑GGGATGAC‑GGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTA < 1:503105/310‑1 CG‑CGCGCTGCTGTTAAGCCGCAAGAATCCGTTTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGA > 1:502902/1‑202 CG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTT‑GCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTT > 1:971938/1‑251 TTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑‑AACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGTC‑CCCGGTTCCG‑TGGCCTTTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCA > 1:89135/1‑155 TGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCGTTGGCC‑TTCAGCCTACTCCGCC‑AACAGGCTGGCTG‑‑AATGACATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTG > 1:1247253/1‑213 AAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑C‑TTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGA‑TTACGTGGTGAGTTTTATTCGTGGCTGGGGATGAC‑GGGCGGGGGATTGATACAGGTgctc > 1:503103/1‑250 GGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTATCCCG‑ACAAATAA > 1:503117/1‑181 T‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCGAACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTA < 1:1241254/204‑1 tgtgtcAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGTCCCCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑‑AATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAAT‑AATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGGCT‑GGGATGAC‑GGGCGGGGGATTGA < 1:503108/222‑1 GTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGC > 1:89261/1‑108 GC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC > 1:89264/1‑72 ACGGCTCTCG‑AAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGC > 1:1197636/1‑93 CGGCTCTCGAAAACCTT‑GG‑TTTGGGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGA‑TTACGTGGTGAG‑TTTATTCGTGGCTGGGGATGACGGGGCGGGGGATTGATACAGGTCGCTCTATTTTAA > 1:503102/1‑242 CGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGG > 1:503110/1‑196 GAAAACCTT‑GGTTTT‑GGG‑AGAAGGCTCTGTCATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACT > 1:1072365/1‑133 GAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGGCT‑GGGATGAC‑GGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGTATGCAACGGAGGATCATGCTCATGGATTACCGTCAAGATCCACGATTGTGACTGATGCAAtc > 1:503089/1‑304 GAAAACCTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGG > 1:1152499/1‑49 CTT‑GG‑TTT‑GGG‑AGAAGGCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCCAAACAGGCTGGCTG‑AAATGCAA‑GGTGCCG‑CTTT < 1:1104803/101‑1 TT‑GGG‑AGAAGGCTCTGCCATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCGCCTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGGCT‑GGGATGAC‑GGG < 1:89254/191‑1 GTATAGACACGAAAACCGCGCAGAAGGAT‑AAGTTCGGCGCGGGTAAGAA‑CGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTAC‑TTTGACATGTTGCAGGAGGAAC‑TTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGC‑ACGACCAGTTACTTACCGCACTTCG‑CGCGCTGCTGTTAAGCCGCAAGAATCCG‑TTTGGCGATATCAAATCGGAT‑GGCACTGTGC‑AAACGGCTCTCGAAAACCTT‑GG‑TTT‑GGG‑AGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1207508‑1207805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tt‑gg‑ttt‑ggg‑agaaggCTCTG‑CATTACCTGTTGGTGT‑‑CCCGGTTCCG‑TGGCC‑TTCAGCC‑ACTCCGCC‑AACAGGCTGGCTG‑AAATGCAATGGTGCCG‑CTTTTTCTGCTGAAGAATA‑CCCGGAACTGGCAAAGGCTTAT‑CCG‑ACAAATAAATTGCCTGATTTACGTGGTGAG‑TTTATTCGTGGCT‑GGGATGAC‑GGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGTATGCAACGGAGGATCATGCTCATGGATTACCGTCAAGATCCACGATTGTGACTGATGCAACG < NC_000913/1209602‑1209320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |