| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1722830 | 32 (0.700) | 14 (0.310) | 13/372 | 2.6 | 30.8% | coding (710/2013 nt) | ydhK | putative transporter YdhK |
| ? | NC_000913 | 1722834 = | 31 (0.690) | coding (714/2013 nt) | ydhK | putative transporter YdhK | |||||
GGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1722607‑1722830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCTC‑ACCGCC‑AGGTGCCACACGAG‑AAATTCTCGAACAGTTGCTGACGGCGCTCGCC‑AGTTCGC‑AAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCC > NC_000913/1722834‑1723056 GGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGCAACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACG < 1:124486/261‑1GGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACG < 1:124485/260‑1 TCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCA < 1:1162301/268‑1 GCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑A < 1:566968/215‑1 TGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGCAACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCTC‑ACCGCC‑AGGTGCCACACGAG‑AAATTCTCGAAC < 1:124488/283‑1 AAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCT < 1:566969/247‑1 ACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAG‑CAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGG < 1:998609/238‑1 GATTACTGGAACATGCCAG‑TTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGCAACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCTC‑ACCGCC‑AGGTGCCACACGAG‑AAATTCTCGAACAGTTGCTGACGGCGCTCGCC‑AGTTCGC‑AA < 1:566977/293‑1 tgccacGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAA‑GGGTGATTGGGCAGATACGTGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AAT < 1:566978/159‑1 CCTGAAACAACCGATGCCATTCGTGCAGGCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGCAACGCGCGCCTTAATGCGCTGCTCCACCAG < 1:1237881/143‑1 GGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACCAAGTGTCATCTCCAGCCTGCGACGTAATGTTGCTCAACTGGCCCTCAACCGCCAAGGTGCCACACGAG‑AAATTCTCGAACAGTTGCTGACGGCGCTCGCCAAGTTCGCAAAACAGATGTTTAC < 1:985456/233‑1 AGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCCACCAGCAAATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCTC‑ACCGCC‑AGGTGCCACACGAG‑AAATTCTCGAACAGTTGCTGACGGCGCTCGCC‑AGTTCGCAAAACAGATGTT < 1:1162683/223‑1 ATTTGCTGCAGTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGCAACGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCTC‑ACCGCC‑AGGTGCCACACGAGAAAATTCTCGAACAGTTGCTGACGGCGCTCGCC‑AGTTCGC‑AAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCC < 1:566989/275‑1 GGAGCCACTTATCCGTTTTCGCCAGC‑ACGCGCGCCTTAATGCGCTGCTCC < 1:986241/50‑1 GGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCA‑GCACATGAAGGGGTGATTGGGCAGATAC‑TGACCATGAATTTGCTGC‑GTATCCAGGCTTTCTGGAGCCAC‑TAT‑CGTTTTCGCCAGC‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1722607‑1722830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGCGCGCCTTAATGCGCTGCTCCACCAGC‑AATTACGTATGACC‑AGTGTCATCTCCAGCCTGCGACGT‑ATGTTGCTCAACTGGCCCTC‑ACCGCC‑AGGTGCCACACGAG‑AAATTCTCGAACAGTTGCTGACGGCGCTCGCC‑AGTTCGC‑AAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCC > NC_000913/1722834‑1723056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |