New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 172283032 (0.700)14 (0.310) 13/372 2.6 30.8% coding (710/2013 nt) ydhK putative transporter YdhK
?NC_000913 1722834 = 31 (0.690)coding (714/2013 nt) ydhK putative transporter YdhK

GGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCC  >  NC_000913/1722557‑1723056
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                            
gggATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAAcgcg                                                                                                                                                                                                                                           >  1:566956/1‑280 (MQ=255)
                                          ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAg                                                                                                                                                                                            >  1:566962/1‑281 (MQ=255)
                                          ttttGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTTGCTGCGTATCCAGGCTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTactgac                                                                                                                                                                                               >  1:566961/1‑273 (MQ=255)
                                                    cggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCAt                                                                                                                                                                                      >  1:1228240/1‑276 (MQ=255)
                                                           atgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTTCTGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTTAATGCgctg                                                                                                                                                                                                                           >  1:1050962/1‑239 (MQ=255)
                                                           atgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCa                                                                                                                                                           >  1:566965/1‑295 (MQ=255)
                                                                      ggcggcatgatgatgatgatcctgccgagcagttccgatgctactgcccttttaaccgcattgaaaaacatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACg                                                                                                                                                                                                      <  1:124486‑M2/36‑1 (MQ=255)
                                                                       ggcggcatgatgatgatgatcctgccgagcagttccgatgctactgcccttttaaccgcattgaaaaacatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACg                                                                                                                                                                                                      <  1:124485‑M2/36‑1 (MQ=255)
                                                                                     gatgcgtACTGCCCCTTTTAACCGCATTGAAAAACATGCACGCCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACg                                                                                                                                                                                                      <  1:566967/224‑1 (MQ=255)
                                                                                                       tAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTg                                                                                                                                                                            >  1:566970/1‑237 (MQ=255)
                                                                                                        tccgatgctactgcccttttaaccgcattgaaaaacatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCa                                                                                                                                                           <  1:1162301‑M2/77‑1 (MQ=255)
                                                                                                              gctactgcccttttaaccgcattgaaaaacatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCa                                                                                                                                                                                                             <  1:566968‑M2/30‑1 (MQ=255)
                                                                                                                ttGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCTGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCTAGTCAACTTACGTATGACCAGTGTCATCTTCattgc                                                                                                                                                                             >  1:566971/1‑228 (MQ=255)
                                                                                                                ttGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCa                                                                                                                                                                                       >  1:566972/1‑217 (MQ=255)
                                                                                                                  gAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCt                                                                                                                                                                             >  1:566973/1‑227 (MQ=255)
                                                                                                                  gAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAgtgt                                                                                                                                                                                         >  1:566974/1‑214 (MQ=255)
                                                                                                                                  ccGATTACTGGAACATGCCACGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTc                                                                                            <  1:566975/288‑1 (MQ=255)
                                                                                                                                   tgaaaaacatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAAc                                                                                                             <  1:124488‑M2/119‑1 (MQ=255)
                                                                                                                                   cGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAAAAAAAAACGCGCGCCTTAATGCGCTGCTCCACCAGc                                                                                                                                                                                                               <  1:985004/185‑1 (MQ=255)
                                                                                                                                    gATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAA‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGc                                                                                                                                                                           <  1:1256760/214‑1 (MQ=255)
                                                                                                                                      ttACTGGAACATGCCAGTTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGtt                                                                                                         >  1:566979/1‑271 (MQ=255)
                                                                                                                                      aaaaacatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCt                                                                                                                                                 <  1:566969‑M2/86‑1 (MQ=255)
                                                                                                                                           acatgcacgcccgattactggaacatgccagtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagcactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTgg                                                                                                                                                      <  1:998609‑M2/82‑1 (MQ=255)
                                                                                                                                               cATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTg                                                                                                                                                               >  1:566980/1‑210 (MQ=255)
                                                                                                                                                      gattactggaacatgccagttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCaa                                                                              <  1:566977‑M2/148‑1 (MQ=255)
                                                                                                                                                                tGGCAGCCTGAAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCCGACCAACGTCGcc                    <  1:566981/331‑1 (MQ=255)
                                                                                                                                                                  tgccacgtttactctggcagcctgaaacaaccgatgccattcgtgcagcacatgaagggtgattgggcagatacgtgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAAt                                                                                                                                                                                                          <  1:566978‑M2/32‑1 (MQ=255)
                                                                                                                                                                           aaaCAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCA‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAAtt                                                                                                                                                                                                         <  1:566982/146‑1 (MQ=255)
                                                                                                                                                                            aacaacCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGATCCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGTCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGAcc                                                                                                                                                                                               <  1:1267395/155‑1 (MQ=255)
                                                                                                                                                                             acaacCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCAtc                                                                                                                                                                                     >  1:566985/1‑161 (MQ=255)
                                                                                                                                                                                    gATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGAcc                                                                                                                                                                                               <  1:566983/147‑1 (MQ=255)
                                                                                                                                                                                    cctgaaacaaccgatgccattcgtgcaggcacatgaaggggtgattgggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaaCGCGCGCCTTAATGCGCTGCTCCACCAg                                                                                                                                                                                                                 <  1:1237881‑M2/28‑1 (MQ=255)
                                                                                                                                                                                     aTGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGc                                                          <  1:566984/272‑1 (MQ=255)
                                                                                                                                                                                                                  aTTGGGCAGATACTGACCATGAATTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGc                                                                                                                                  >  1:124491/1‑172 (MQ=255)
                                                                                                                                                                                                                                  aCCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACg                                     >  1:566988/1‑248 (MQ=255)
                                                                                                                                                                                                                                    ggcagatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAAGTGTCATCTCCAGCCTGCGACGTAATGTTGCTCAACTGGCCCTCAACCGCCAAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAAGTTCGCAAAACAGATGTTTac                                                                  <  1:985456‑M2/166‑1 (MQ=255)
                                                                                                                                                                                                                                       agatactgaccatgaatttgctgcgtatccaggctttctggagccactatcgttttcgccagcaCGCGCGCCTTAATGCGCTGCTCCACCAGCAAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAAACAGATGtt                                                                     <  1:1162683‑M2/159‑1 (MQ=255)
                                                                                                                                                                                                                                          gaattGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTACACCGTCGCACGTATTATCGCCCCGCTACGccc                                 >  1:566990/4‑244 (MQ=255)
                                                                                                                                                                                                                                                    atttgctgcagtatccaggctttctggagccactatcgttttcgccagcaaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGcc  <  1:566989‑M2/224‑1 (MQ=255)
                                                                                                                                                                                                                                                       tCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGAc                                                                                                   >  1:1044446/1‑169 (MQ=255)
                                                                                                                                                                                                                                                          aGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACg                                     >  1:1206235/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                tCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCCTCACCGCCAGGTGc                                                                                                                                  <  1:566992/131‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCg                                                                                                                                                                          <  1:566991/89‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ggagccacttatccgttttcgccagcaCGCGCGCCTTAATGCGCTGCTcc                                                                                                                                                                                                                       <  1:986241‑M2/23‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                  aaaaaCGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCACGTCGCCGACTATCGGCACGTc     <  1:1105432/223‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                            
GGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGC‑‑‑‑‑‑‑AAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCC  >  NC_000913/1722557‑1723056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.