| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2728679 | NA (NA) | 26 (0.580) +TTT |
15/358 | 2.1 | 100% | noncoding (506/2904 nt) | rrlG | 23S ribosomal RNA |
| ? | NC_000913 | 2728680 = | 0 (0.000) | noncoding (505/2904 nt) | rrlG | 23S ribosomal RNA | |||||
TTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAA‑TTTTTCAACA‑TTAGTCGGTTCGGTCCTCCAGTTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2728392‑2728679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTCACTCCCCTCGCC‑GGGGTTC‑‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCA‑TTTTTGTGTAC‑GGGGCTGTCACCCTGTATCGCGCGCC‑TTTCCAGACGCTTCCACTAACACACACACTGATTCAGGCTCTGGGCTGCT‑CCCCGTTCGCTCGCCGCTACT‑GGGGGAATCTCGGTTG > NC_000913/2728680‑2728960 |||| TTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATTTTTTCAACATTTAGTCGGTTCGGTCCTCCAGTTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATACAAAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TT > 1:1044699/1‑293 CGCTAA‑TTTTTCAACA‑TTAGTCGGTTCGGTCCTCCAGTTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TT > 1:298665/1‑256 TTTTCAACA‑TTAGTCGGTTCGGTCCTCCAGTTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TT > 1:987047/1‑249 TTTCAACA‑TTAGTCGGTTCGGTCCTCCAGTTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTT < 1:1041068/249‑1 TTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTT < 1:688808/220‑1 TAGTGTTACCCCAACCTTCAACCTGCCCCATGGCTAGATCACCGGGTTTCGGGTCTATACCCCTGCAACTTAACGCCCCAG‑TTAAGACTCGG‑TTTC‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGACCCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCTCCCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑T < 1:863172/224‑1 TAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGA > 1:1043885/1‑291 CTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TT‑AGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATTACGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTTTT < 1:1227689/190‑1 CACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAGTTTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTACTTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCATA‑T > 1:1152201/1‑288 AACTTAACG‑CCCAG‑TTAAGACTCGGTTTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGG‑TTCAGGTTC‑TTT > 1:863168/1‑156 aAAGACTCGG‑TTTTCCCCTTCGGGCTCCCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATACAAAAAGGTACGCAGTCGCACGCCTAAGCGTGCTCCCCA‑CTGCTTGTACGTACACGG‑TTCAGGTTC‑TTT > 1:884299/2‑146 CCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCCGGGGGTTC‑‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCATACTTCAGACAGGATCACCACGTGTCCCGCCCTA > 1:787988/1‑262 TAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTTTTTcactc > 1:1231792/1‑109 CTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTTTT < 1:1164656/104‑1 ACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTTTTTTTCACTCCCCTCGCC‑GGGGTTCTTTTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCC > 1:1076083/1‑195 GAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCATCTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCC > 1:1051037/1‑133 AAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑TTT < 1:1172787/66‑1 CACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTTGGAGGATGGTCCCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCA‑TTTTTGTGTACGGGGGCTGTCACCCTGTATCGCGCGCCTTTTCCAGACGCTTCCACTAACACACACACTGATTCAGGCTCTGGGCTGCTCCCCCGTTCGCTCGCCGCTACTGGGGGGAATCTCGGTTG > 1:1181567/1‑339 TAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCG > 1:1202191/1‑60 CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTCTTTTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCA > 1:280744/1‑138 CTGCTTGTACGTACACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTTTTGTGTAC‑GGGGCTGTCACCCTGTATCGCGCGCC‑TTTCCAGACGCTTCCACTAACACACACACTGATTCAGGCTCTGGGCTGCT‑CCCCGTTCG > 1:1016908/1‑285 GCTTGTACGTACACGGTTTCAGGTTT‑CTTTTTTTCACTCCCCTCGCC‑GGGGTTCTTTTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTC > 1:1032130/1‑95 TGTACGTACACGGTTTCAGGTTC‑TTTTTTTTCACTCCCCTCGCC‑GGGGTTCTTTTTTCGCCTTTCCCTCACGGTACTTGGTTCACTATCGGTCAGTCAGGA > 1:977788/1‑101 CACGGTTTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCTTTTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTTGGAGGATGGTCCCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCA‑TTTTTGTGTAC‑GGGGCTGTCACCCTGTA > 1:1006557/1‑205 TTCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCA‑TT > 1:1168589/1‑171 TCAGGTTC‑‑TTTTTTTCACTCCCCTCGCC‑GGGGTTCT‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGT‑CCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCC > 1:1077661/1‑140 |||| TTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAA‑TTTTTCAACA‑TTAGTCGGTTCGGTCCTCCAGTTAGTGTTA‑CCCAACCTTCAACCTG‑CCCATGGCTAGATCACCGGGTTTCGGGTCTATA‑CCCTGCAACTTAACG‑CCCAG‑TTAAGACTCGG‑TTT‑‑CCCTTC‑GGCT‑CCCCTATT‑CGGTTAACCTTGCTACAGAATATAAGTCGCTGA‑CCCATTATAC‑AAAAGGTACGCAGTCACACGCCTAAGCGTGCT‑CCCA‑CTGCTTGTACGTACACGGTTTCAGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2728392‑2728679‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTCACTCCCCTCGCC‑GGGGTTC‑‑TTTTCGCCTTTCCCTCACGGTAC‑TGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC‑TTGGAGGATGGTCCCCCCATA‑TTCAGACAGGAT‑ACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCA‑TTTTTGTGTAC‑GGGGCTGTCACCCTGTATCGCGCGCC‑TTTCCAGACGCTTCCACTAACACACACACTGATTCAGGCTCTGGGCTGCT‑CCCCGTTCGCTCGCCGCTACT‑GGGGGAATCTCGGTTG > NC_000913/2728680‑2728960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |