New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1873039	0 (0.000)	65 (1.430)	45/374	0.1	100%	coding (999/1491 nt)	dgcJ	putative diguanylate cyclase DgcJ
	?	NC_000913	1978503 =	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

GTGCTGCTGGATATTAACAAAAAC‑AATCTGCGGAATATCTTTTA‑TACTCATGACCGCCCTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCGCAAATTGCAGCACAACTGCCTGAACGTA  >  NC_000913/1872746‑1873376                                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                                                                  gtgCTGCTGGATATTAACAAAAAC‑AATCTGCGGAATATCTTTTA‑TACTCATGACCGCCCTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGGTATG‑CACggtaatgactccaactt                                                                                                                                                                                                                                                                                                                                  >  1:585325‑M1/1‑295 (MQ=255)          gATATTAACAAAAACAAATCTGCGGAATATCTTTTATTACTCATGACCGCCCTCTCCTCTGGCGTTTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCATTTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCGTTTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttca                                                                                                                                                                                                                                                                                                             >  1:1200712‑M1/1‑290 (MQ=255)                                          tttA‑TACTCATGACCGCCCTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTACTTTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactc                                                                                                                                                                                                                                                                                                                                        >  1:585329‑M1/1‑255 (MQ=255)                                                        ccGCCCTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CAgtaatgactccaacttattgatagtgtttta                                                                                                                                                                                                                                                                                                                     <  1:134419‑M1/272‑32 (MQ=255)                                                        ccGCCCTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACA‑TATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttatt                                                                                                                                                                                                                                                                                                                               <  1:134420‑M1/260‑21 (MQ=255)                                                           cccTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggta                                                                                                                                                                                                                                                                                                                                               >  1:585331‑M1/1‑238 (MQ=255)                                                              tctcctctGGCG‑‑TTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaact                                                                                                                                                                                                                                                                                                                                   <  1:1142076‑M1/250‑17 (MQ=255)                                                                                    tGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaat                                                                                                                                                                                                                                                                                                                                             <  1:585333‑M1/220‑7 (MQ=255)                                                                                      tCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTTACC‑GGGCGGCATTC‑GTGTCTCGTTTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCGATTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTGAAA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagt                                                                                                                                                                                                                                                                                                                         >  1:1152405‑M1/1‑216 (MQ=255)                                                                                           cTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                                                                                                                                                                                                              <  1:134422‑M1/292‑86 (MQ=255)                                                                                                      cgatTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                                                                                                                                                                                                              <  1:585336‑M1/281‑86 (MQ=255)                                                                                                       gatTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCGTTTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaactttattgatagtgtttttatgttcag                                                                                                                                                                                                                                                                                                          >  1:1198808‑M1/1‑196 (MQ=255)                                                                                                                  cgACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCGATCCCCCA‑TTC‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGG‑AAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                                                                                                                                                                                                                        <  1:134423‑M1/243‑60 (MQ=255)                                                                                                                                       cGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaact                                                                                                                                                                                                                                                                                                                                   >  1:585343‑M1/1‑163 (MQ=255)                                                                                                                                          aGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                                                                                                                                                                                                                      <  1:1262490‑M1/285‑126 (MQ=255)                                                                                                                                                  tGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg                                                                                                                                                                                                              >  1:134425‑M1/1‑152 (MQ=255)                                                                                                                                                     tCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                                                                                                                                                                                                              <  1:1234207‑M1/234‑86 (MQ=255)                                                                                                                                                           aTGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGTATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtc                                                                                                  <  1:807630‑M1/384‑242 (MQ=255)                                                                                                                                                           aTGTCAGTTACGT‑CATGAC‑TTACC‑GGGCGGCATTCAGTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGA‑TTTGAC‑GGCG‑TTAA‑TTTGCTG‑AA‑TA‑GGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgct                                                                                                                                                                           <  1:1263412‑M1/308‑169 (MQ=255)                                                                                                                                                            tGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaat                                                                                                                                                                                                >  1:1175255‑M1/1‑142 (MQ=255)                                                                                                                                                              tCAGTTACGTCCATGAC‑TTACCGGGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttgtcatgcagctccaccgattttgagaacgacagcgacttc                                                                                                                                                                                                                                                   >  1:585344‑M1/1‑141 (MQ=255)                                                                                                                                                               cAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgata                                                                                                                                                                                                                                                                                                                           >  1:1106940‑M1/1‑139 (MQ=255)                                                                                                                                                                           tGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtat                                                                                                                                                                                    >  1:585345‑M1/1‑127 (MQ=255)                                                                                                                                                                                  accggggcggcATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc                                                                                                                                                                                                        >  1:585346‑M1/5‑122 (MQ=255)                                                                                                                                                                                  aCC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTCTTTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttt                                                                                                                                                                             >  1:1252911‑M1/1‑122 (MQ=255)                                                                                                                                                                                   cgggtcggtcattc‑gtgtcTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattc                                                                                                                                                                                              <  1:807644‑M1/261‑150 (MQ=255)                                                                                                                                                                                      gggCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATGTCACggtaatgactccaacttattgatagtgttttatgttcagataatgccccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccagccgtgcc                                                                                                                                                                                                                                 <  1:807650‑M1/233‑115 (MQ=255)                                                                                                                                                                                                c‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTCTTTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                                                                                                                                                                                                                           >  1:988233‑M1/1‑109 (MQ=255)                                                                                                                                                                                                c‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagata                                                                                                                                                                                                                                                                                                         >  1:585347‑M1/1‑108 (MQ=255)                                                                                                                                                                                                       tcG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatcacagcgg                                                                                                                                >  1:585348‑M1/1‑102 (MQ=255)                                                                                                                                                                                                       tcG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGG‑AAAGCGTTTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat                                                                                                                                                                                                                   >  1:995527‑M1/1‑102 (MQ=255)                                                                                                                                                                                                        cG‑TTATCCA‑TTGTATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatagactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgta                                                                                                                                                                                    <  1:371304‑M1/261‑160 (MQ=255)                                                                                                                                                                                                        cG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                                                                                                                                                                                                                     <  1:807654‑M1/163‑63 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTACTTTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                                                                                                                                                                                                            >  1:585353‑M1/1‑91 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTACTTTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                                                                                                                                                                                                                             >  1:585352‑M1/1‑91 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTAC‑TTTATCTACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgaactccaacttattcgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                                                                                                                                                                                                                                  >  1:585351‑M1/1‑91 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCGTTTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgctttgctgatttacgtgcagctttcccctttcaggcgggattcatacagcggccagccatccgtca                                                                                                               >  1:1167787‑M1/1‑91 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgac                                                                                                                                                                        >  1:585350‑M1/1‑90 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                                                                                                                                                                                                                             >  1:585349‑M1/1‑90 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                                                                                                                                                                                                                             >  1:585354‑M1/1‑90 (MQ=255)                                                                                                                                                                                                                     g‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgccccgatgac                                                                                                                                                                                                                                                                                            <  1:374124‑M1/145‑56 (MQ=255)                                                                                                                                                                                                                            ctttac‑tttaTC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagcttttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagggtgacagcag                                                                                  >  1:342277‑M1/1‑84 (MQ=255)                                                                                                                                                                                                                            ctttac‑tttaTC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgtccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagcttttcccttcaggcgggattcattacagcggccagcatccgtcatccatatca                                                                                                        >  1:375222‑M1/1‑84 (MQ=255)                                                                                                                                                                                                                                    ttaTC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGACTGGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcata                                                                                                                                       >  1:256291‑M1/1‑78 (MQ=255)                                                                                                                                                                                                                                    ttaTC‑ACGTC‑TTCG‑CTGGAAAGCGCTTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataattgcccgatgactttgtcatggca                                                                                                                                                                                                                                                                                >  1:134426‑M1/1‑78 (MQ=255)                                                                                                                                                                                                                                     taTC‑ACGTCTTTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat                                                                                                                                                                                                                   >  1:1061456‑M1/1‑77 (MQ=255)                                                                                                                                                                                                                                     taTC‑ACGTC‑TTCGTTGGAAAAGCGTTTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AATTATGGTGCGG‑ATG‑CACggtaatgacttccaact                                                                                                                                                                                                                                                                                                                                  >  1:1188174‑M1/1‑79 (MQ=255)                                                                                                                                                                                                                                     taTC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGGTATG‑CACtggtaatg                                                                                                                                                                                                                                                                                                                                           >  1:585356‑M1/1‑77 (MQ=255)                                                                                                                                                                                                                                       tC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                                                                                                                                                                                                                           <  1:256305‑M1/114‑41 (MQ=255)                                                                                                                                                                                                                                                ttCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcgg                                                                                                                                 >  1:483394‑M1/1‑67 (MQ=255)                                                                                                                                                                                                                                                ttCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt                                                                                                                                                                                                                                                   >  1:134427‑M1/1‑67 (MQ=255)                                                                                                                                                                                                                                                  cG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgccccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                                                                                                                                                                                                                       >  1:1183936‑M1/1‑65 (MQ=255)                                                                                                                                                                                                                                                   g‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                                                                                                                                                                                                                                    <  1:1081800‑M1/175‑112 (MQ=255)                                                                                                                                                                                                                                                                       ctgGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                                                                                                                                                                                                                             >  1:483412‑M1/1‑46 (MQ=255)                                                                                                                                                                                                                                                                       ctgGA‑TTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgta                                                                                                                                                                                      <  1:1266893‑M1/202‑158 (MQ=255)                                                                                                                                                                                                                                                                                      cG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcctcccagccgtgc                                                                                                                                                                                                                                     >  1:78617‑M1/1‑32 (MQ=255)                                                                                                                                                                                                                                                                                       g‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CAgtaatgactccaacttattgatagtgttttatgttcagataatgccccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccagccgtgcc                                                                                                                                                                                                                                   <  1:371302‑M1/144‑114 (MQ=255)                                                                                                                                                                                                                                                                                           aaTTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttaatgccgccaac                                                                                                                                                                                                >  1:483414‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                                                                                                       a‑tatGGTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt                                                                                                                                                                                                                 <  1:78615‑M1/147‑131 (MQ=255)                                                                                                                                                                                                                                                                                                             gTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccccttcaggcgggattcatacagcggccagccatccgtcatccatatcac                                                                                                        <  1:807631‑M1/247‑236 (MQ=255)                                                                                                                                                                                                                                                                                                             gTGCGG‑ATG‑CACggtaatgactccaacttattgatagtgttttatgttcagataatgccccgatgacttttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaag                                                                                           <  1:807629‑M1/260‑249 (MQ=255)                                                                                                                                                                                                                                                                                                                  g‑ATG‑CAgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccct                                                                                                                                                         <  1:17436‑M1/194‑188 (MQ=255)                                                                                                                                                                                                                                                                                                                    aTG‑CACgtaatgactccaacttattgatagtgttttatgttcagataatgccccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgtcagctttccccgttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaaagggtgacagcaggctcataagacgccccagcgtcgccatagtgcgttcaccgaatacgtgcgacaacaaccgtcttccggagactgtca  <  1:342291‑M1/343‑338 (MQ=255)                                                                                                                                                                                                                                                                                                                        cACggtaatgactccaactttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga                                                                                                                                                                                                                                                           >  1:256303‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                                                                        cACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatttacgtgcagct                                                                                                                                                             >  1:1058101‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                                                                  GTGCTGCTGGATATTAACAAAAAC‑AATCTGCGGAATATCTTTTA‑TACTCATGACCGCCCTCTCCTCTGGCG‑TTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGAC‑TTACC‑GGGCGGCATTC‑GTGTCTCG‑TTATCCA‑TTG‑ATATTCTTTAC‑TTTATC‑ACGTC‑TTCG‑TGGAAAAGCG‑TTCTGTTCTGGATTTTGAC‑GGCG‑TTAATTTTGCTG‑AA‑TATGGTGCGG‑ATG‑CACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCGCAAATTGCAGCACAACTGCCTGAACGTA  >  NC_000913/1872746‑1873376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.