New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1873039	0 (0.000)	65 (1.430)	45/374	0.1	100%	coding (999/1491 nt)	dgcJ	putative diguanylate cyclase DgcJ
	?	NC_000913	1978503 =	NA (NA)					noncoding (768/768 nt)	IS1	repeat region

TGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATACGTG  >  NC_000913/1978254‑1978805                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                                         tGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAgtg‑t                                                                                                                                                                                                                                                                                              <  1:596553/277‑1 (MQ=255)                     aaaaaaTAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑‑GGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑‑TTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATg                                                                                                                                                                                                                                                       >  1:596560/1‑290 (MQ=255)                          ataatTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATACGAACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACACAAAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGt                                                                                                                                                                                                                                                                                                                        <  1:1055180/229‑1 (MQ=255)                                                               aGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAATGGGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATa                                                                                                                                                                                                                                                                               >  1:596565/1‑231 (MQ=255)                                                                     accaccTTTTTGGTTTAATATGTCCTTACAAATAGAAAT‑GGGTCTTTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTcc                                                                                                                                                                                                                                                >  1:596566/1‑252 (MQ=255)                                                                                   ttAATATGTCCTTACAAATAGAAAT‑GGGTCTTTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATa                                                                                                                                                                                                                                                                                                   >  1:596568/1‑192 (MQ=255)                                                                                    tAATATGTCCTTACAAATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAATTCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGt                                                                                                                                                                                                                                                                                                                        >  1:140674/1‑170 (MQ=255)                                                                                         tGTCCTTACAAATAGAAAT‑GGGTCTTTTACACTTATCTAAGATTTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAAT‑ATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑‑GGTAATg                                                                                                                                                                                                                                                                                                                    >  1:1044086/1‑168 (MQ=255)                                                                                             cTTAC‑AATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TGCCCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGa                                                                                                                                                                                                                              <  1:596567/244‑1 (MQ=255)                                                                                                       gAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCAT‑CAGCTCCAccatttgacgaa                                                                                                                                                                                                                                   >  1:140677/1‑219 (MQ=255)                                                                                                           t‑GGGTC‑TTTACACTTATCTAAGA‑‑TTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTc                                                                                                                                                                                 <  1:140675/273‑1 (MQ=255)                                                                                                             gggTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑‑TTGTCATGCAGCTCCACCGA‑TTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCa                                                                                                                                                                                                           >  1:140678/1‑244 (MQ=255)                                                                                                                   tttACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑g                                                                                                                                                                                                                                                                                  <  1:140676/177‑1 (MQ=255)                                                                                                                    ttACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCATGATAC‑TG‑‑CCGATGAC‑tt                                                                                                                                                                                                                                                              >  1:596570/1‑192 (MQ=255)                                                                                                                                aaGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAg                                                                                                                                                                                                                                                                                                  >  1:140681/1‑149 (MQ=255)                                                                                                                                 aGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑ttt                                                                                                                                                                                                                                                                                            >  1:596571/1‑153 (MQ=255)                                                                                                                                      ttttCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGAGGGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACACAAAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTg                                                                                                                                                                                                                                                                                                      <  1:1104834/143‑1 (MQ=255)                                                                                                                                      ttttCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACACAAAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTg                                                                                                                                                                                                                                                                                                      <  1:987410/141‑1 (MQ=255)                                                                                                                                             aaa‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAAc                                                                                                                                                                                                                                <  1:140680/197‑1 (MQ=255)                                                                                                                                                   gACGCAACTGTACTCGATCACTACACGC‑ACATAC‑AAC‑GA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACACAAAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TGCCCCGATGACTTTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGTCCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATaa                                          <  1:596572/375‑1 (MQ=18)                                                                                                                                                        aaCTGTACTCG‑TCACTACACGCGACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCa                                                                                                       <  1:596573/306‑1 (MQ=255)                                                                                                                                                                  g‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTaa                                                                                                                                                                                                                                                                                                                      >  1:140683/1‑97 (MQ=255)                                                                                                                                                                          cacGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAACTG‑CCCGATGAC‑TTTGTCATGCAGCTc                                                                                                                                                                                                                                                 >  1:596575/1‑155 (MQ=255)                                                                                                                                                                          cacGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GAT‑A‑TG‑CCCg                                                                                                                                                                                                                                                                      >  1:596576/1‑133 (MQ=255)                                                                                                                                                                             gcgacaTAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACACAAAAACAC‑TCAAATTACTTAACATAAAAT‑GGGTAATGACTCCAACTTATTGATAGTGTTTTTATGTTCA‑GATAA‑TGCCCCGATGAC‑TTTGTCATGCAGCTCCACCGAt                                                                                                                                                                                                                                          <  1:1108592/161‑1 (MQ=25)                                                                                                                                                                                     c‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCaa                                                                                                                                                                                                                                                                                                             >  1:596578/1‑89 (MQ=255)                                                                                                                                                                                                 gggCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GAt                                                                                                                                                                                                                                                                                <  1:596577/106‑1 (MQ=255)                                                                                                                                                                                                      gCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AA‑TACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTc                                                                                                                                                                                                                                                 >  1:1033329/1‑128 (MQ=255)                                                                                                                                                                                                       cGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑Gaa                                                                                                                                                                                                                                 >  1:596579/1‑143 (MQ=255)                                                                                                                                                                                                         aTTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑gg                                                                                                                                                                                                                                                                                                                          >  1:596580/1‑58 (MQ=255)                                                                                                                                                                                                            ttCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGAt                                                                                                                                                                                                                                          <  1:140684/131‑1 (MQ=255)                                                                                                                                                                                                               aataatGCGTAGATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGTCCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCg                                                                                                                                                       <  1:596581/208‑1 (MQ=255)                                                                                                                                                                                                                        t‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TGCCCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGACGAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTC‑ATTCGCGTGCGTATATCGCTTGc                                                                                                                                           >  1:596583/1‑211 (MQ=17)                                                                                                                                                                                                                             gCAGATCACAC‑AAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGcc                                                                                                                                                                                                   <  1:999192/151‑1 (MQ=255)                                                                                                                                                                                                                             cagaaTCACAC‑AAAACAC‑TC‑AA‑TACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTc                                                                                                        <  1:993843/234‑1 (MQ=255)                                                                                                                                                                                                                                 aTCACAC‑AAAACAC‑TCAAATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTc                                                                                                                                                                   <  1:1025894/179‑1 (MQ=255)                                                                                                                                                                                                                                  tCACAC‑AAAACACATC‑AATTACTTAACAT‑AAAT‑GGGT‑ATGACTCCAACTTATTGATAGTG‑TTTTATg                                                                                                                                                                                                                                                                                        >  1:1240098/1‑67 (MQ=25)                                                                                                                                                                                                                                    acac‑aAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGTCCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTg                                                                                                                                         <  1:596582/201‑1 (MQ=255)                                                                                                                                                                                                                                         aaaaCAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑ccc                                                                                                                                                                                                                                                                       >  1:140685/1‑75 (MQ=255)                                                                                                                                                                                                                                                  c‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑‑TTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGgccagcca                                                                                        >  1:596587/1‑235 (MQ=255)                                                                                                                                                                                                                                                     aTTACTTAACATAAAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCttt                                                                                                                          <  1:596585/202‑1 (MQ=25)                                                                                                                                                                                                                                                      ttACTTAACAT‑‑AAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGACTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGAt                                                                                                                                       <  1:596584/186‑1 (MQ=25)                                                                                                                                                                                                                                                        aCTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTg                                                                                                                                         <  1:990868/183‑1 (MQ=38)                                                                                                                                                                                                                                                          ttAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCCCCAGc                               <  1:596586/286‑1 (MQ=34)                                                                                                                                                                                                                                                           tAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGAcagc                                                    <  1:1091074/264‑1 (MQ=34)                                                                                                                                                                                                                                                            aaCAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGACTTTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCAt                                                                                >  1:140686/1‑236 (MQ=21)                                                                                                                                                                                                                                                            aaCAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTg                                                                                                                                         >  1:596590/1‑179 (MQ=35)                                                                                                                                                                                                                                                              cAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTg                                                                                                                                                                                                                                      <  1:1228139/88‑1 (MQ=40)                                                                                                                                                                                                                                                                  aaaT‑GGGCAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATACGTg  >  1:596591/1‑308 (MQ=14)                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                                         TGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAAT‑GGGTC‑TTTACACTTATCTAAGA‑TTTTTCCTAAA‑TCGACGCAACTGTACTCG‑TCACTACACGC‑ACATAC‑AACGGA‑GGGGGGCTGCGATTTTCAATAATGCGT‑GATGCAGATCACAC‑AAAACAC‑TC‑AATTACTTAACAT‑AAAT‑GGGTAATGACTCCAACTTATTGATAGTG‑TTTTATGTTCA‑GATAA‑TG‑CCCGATGAC‑TTTGTCATGCAGCTCCACCGATTTTGA‑GAACGACAGCGAC‑TTCCGT‑CCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC‑TGCGTATATCGCTTGCTGATTACGTGCAGCTTT‑CCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATACGTG  >  NC_000913/1978254‑1978805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.