Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 284794 | 285103 | 310 | 16 [15] | [15] 16 | yagF | CP4‑6 prophage; D‑xylonate dehydratase |
GGCGATCGACCCGTCGGTGGT‑GGGCGAAGATGGCGTATACCACCACACCGGCC‑GGGTGC‑GGGTG‑TTTGTCTCGG‑AAGCGCAGGCGATCAAGGCGATCAAGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGA > NC_000913/284562‑284903 | ggCGATCGA‑CCGTCGGTGGTGGGGCGAAGATGGCGTATACCACCACACCGGCCGGGGTGCGGGGTGTTTTGTCTCGG‑AAGCGCAGGCGATCAAGGCGATCAAGCGGGG‑AAGAGATTGTGCAGGGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATgcgcg > 1:374726/1‑248 (MQ=255) gtggggCGAAGATGGCGTATACCACCACACCGGCC‑GGGTGC‑GGGTG‑TTTGTCTCGG‑AAGCGCAGGCGATCAAGGCGATCAAGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCtc > 1:374729/4‑254 (MQ=255) gggCGAAGATGGCGTATACCACCACACCGGCC‑GGGTGC‑GGGTG‑TTTGTCTCGG‑AAGCGCAGGCGATCAAGGCGATCAAGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTc < 1:374728/237‑1 (MQ=255) gggtgcggggtG‑TTTGTCTCGG‑AAGCGCAGGCGATCAAGGCGATCAAGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGa < 1:19358/185‑1 (MQ=255) ttGTCTCGGTAAGCGCAGGCGATCAAGGCGATCAAGC‑GGGTAAGAGATTGTGCA‑GGGCGATATC‑ATAGGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGCAATGGAAGAGACCTAACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTACGCTCATCAcc < 1:374732/176‑1 (MQ=255) ctcggtaaGCGCAGGCGATCAAGGCGATCAAGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCtcatc < 1:374733/158‑1 (MQ=255) ggcgatcaaggcgatcaaGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCA‑CGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCtcatc < 1:374734/150‑1 (MQ=255) aaggcgatcaagC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGG‑CGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCAcc < 1:1146740/146‑1 (MQ=255) tcaagC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑ATAGGTGGTGATCGGCGGCGGG‑CGTCC‑GGCACCGGCAATGGAAGAGACCTAACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTACGCTCATCAcc < 1:374736/143‑1 (MQ=255) caagC‑GGG‑AAGAGATTGTGCA‑GGGCGATATCGAT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCA‑CGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCg < 1:374737/193‑1 (MQ=255) gggCGATATCGAT‑GGTGGTGATCGGCGGCGGGCCGTCCGGGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCT‑AAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCg < 1:374738/173‑1 (MQ=255) gcaccggc‑aTGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCA‑CGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGc < 1:1188714/121‑1 (MQ=255) gcacggc‑aTGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCg < 1:19359/130‑1 (MQ=255) ccT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCga < 1:374739/169‑1 (MQ=255) cATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGc < 1:19360/72‑1 (MQ=255) tctcGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGcc > 1:374740/1‑75 (MQ=255) | GGCGATCGACCCGTCGGTGGT‑GGGCGAAGATGGCGTATACCACCACACCGGCC‑GGGTGC‑GGGTG‑TTTGTCTCGG‑AAGCGCAGGCGATCAAGGCGATCAAGC‑GGG‑AAGAGATTGTGCA‑GGGCGATATC‑AT‑GGTGGTGATCGGCGGCGGGCCGTCC‑GGCACCGGC‑ATGGAAGAGACCT‑ACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGT‑CGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGA > NC_000913/284562‑284903 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |