New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 96890	35 (0.530)	3 (0.050)	3/326	NT	7.2%	coding (889/1083 nt)	mraY	phospho‑N‑acetylmuramoyl‑pentapeptide‑ transferase
	?	NC_000913	2769127 =	43 (0.660)					coding (463/822 nt)	yfjQ	CP4‑57 prophage; protein YfjQ

ATTTGTCGCCGGTGGTTTTGCGCTGGTGGCGTGGGCGACCGGCAATATGAACTTTGCCAGCTACTTGCATATACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGC  >  NC_000913/96619‑97149                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                    tgtgggggccgtgggtgttgggctgggtgCGTTGTCGACCGGCAATATGAACGTTGCCAGCTACTTGCATAGACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGT                                                                                                                                                                                                                                                                     <  2:715506‑M1/259‑1 (MQ=255)              ggtTTTGCGCTGGTGGCGTGGGCGACCGGCAATATGAACTTTGCCAGCTACTTGCATATACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAAc                                                                                                                                                                                                                                                        <  1:46714/272‑1 (MQ=255)                                                           aGCTACTTGCATATACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTTCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATGATGGGGGTGGTGTTGGGGGTAGCAACGCTTTCTGTCATCCTGCAAGTCGGCCCCTTTAAACTGGCCGGagc                                                                                                                                                                                                           >  2:413900/1‑270 (MQ=255)                                                                 tttcttttgccGTATCTGCTACACGCCGGGGAACTGGTTATTGTCTGTACCGTGATAGTCGTGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTAt                                                                                                                                                                                                     <  1:1064570/263‑1 (MQ=255)                                                                             tATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGTGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGc                                                                                                                                                                                         <  1:419254/272‑1 (MQ=255)                                                                             tATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGaaa                                                                                                                                                                                                                                                         >  1:576032/1‑208 (MQ=255)                                                                              aTCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAAc                                                                                                                                                                                                                                                        <  2:576031/208‑1 (MQ=255)                                                                                                                  ccGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTgg                                                                                                                                                                                                                                                               >  1:177129/1‑165 (MQ=255)                                                                                                                   cgcgATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGt                                                                                                                                                                                                                                                              <  2:177129/165‑1 (MQ=255)                                                                                                                                         gtgttCTTGTGGTTTAAC‑CCTTTTCCGTGTATGTTTTTTTGGGGGGTTGTAGGTTGGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGttt                                                                                                                             <  2:244257/269‑1 (MQ=255)                                                                                                                                                 gtgGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGatta                                                                                                                     >  1:516734/1‑272 (MQ=255)                                                                                                                                                                 ccGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTTCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAgg                                                                                                                                                                                                                                    >  2:205988/1‑145 (MQ=255)                                                                                                                                                                  cGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCtt                                                                                                                                                                                                                                                    >  2:280080/1‑128 (MQ=255)                                                                                                                                                                  cGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGt                                                                                                                                                                                                                                   <  1:205988/145‑1 (MQ=255)                                                                                                                                                                  cGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCa                                                                                                                                                                                        >  1:701921/1‑188 (MQ=255)                                                                                                                                                                  cGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGT                                                                                                                                                                                                                                                                     >  1:161310‑M1/1‑111 (MQ=255)                                                                                                                                                                   ggCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGtt                                                                                                                                                                                                                                                                    <  2:161310/111‑1 (MQ=255)                                                                                                                                                                   ggCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCttt                                                                                                                                                                                                                                                   <  1:280081/128‑1 (MQ=255)                                                                                                                                                                   ggCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCAc                                                                                                                                                                                       <  2:701920/188‑1 (MQ=255)                                                                                                                                                                                                 cGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCCCCGATTCATCACCACTATGAACTGa                                                                                                                                                               >  2:24420/1‑183 (MQ=255)                                                                                                                                                                                                  gCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGaa                                                                                                                                                              <  1:24420/183‑1 (MQ=255)                                                                                                                                                                                                      gCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGaaa                                                                                                                                                                                                                                                         >  2:853691/1‑88 (MQ=255)                                                                                                                                                                                                      gCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTTTTTCGCGGAAGCCGGTTCGGATTGGTCTGGAAACGCTTGATGGACGTTAATc                                                                 >  2:692382/1‑272 (MQ=255)                                                                                                                                                                                                       cGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAAc                                                                                                                                                                                                                                                        <  1:853692/88‑1 (MQ=255)                                                                                                                                                                                                              tggtgCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCGGGTTCTGATTGTCCTGGCAATGCTGAAGGTCCTTTAATCAAGGCTGa                                                         >  2:696407/1‑272 (MQ=255)                                                                                                                                                                                                                    gTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATgg                                                                                                                                                                                          >  2:673459/1‑137 (MQ=255)                                                                                                                                                                                                                     ttAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGc                                                                                                                                                                                         <  1:673460/137‑1 (MQ=255)                                                                                                                                                                                                                      tAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTgaagtgctggggatttttgagcgtgtggaagaaaagagggatgccatgcagtcgttgcttttaccgccacctgtgcagcaggcactggcaaaagcagcgcttacgtatcgctttggtgaggaccaccagccggttactgaat                                                                                                                       >  1:434427‑M1/1‑60 (MQ=255)                                                                                                                                                                                                                       aGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTgaagtgctggggatttttgagcgtgtggaagaaaagagggatgccatgcagtcgttgcttttaccgccacctgtgcagcaggcactggcaaaagcagcgcttacgtatcgctttggtgaggaccaccagccggttactgaatc                                                                                                                      <  2:434426‑M1/202‑144 (MQ=255)                                                                                                                                                                                                                                cGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAgg                                                                                                                                                                                                                                    >  2:740984/1‑83 (MQ=255)                                                                                                                                                                                                                                 gCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGt                                                                                                                                                                                                                                   <  1:740985/83‑1 (MQ=255)                                                                                                                                                                                                                                  ccGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCt                                                                                >  2:249598/1‑229 (MQ=255)                                                                                                                                                                                                                                   cGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTg                                                                               <  1:249598/229‑1 (MQ=255)                                                                                                                                                                                                                                     tACTGCTACGTCAGGAATTCCTGCTGGTGGTTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCa                                  <  1:289393/272‑1 (MQ=255)                                                                                                                                                                                                                                      gcTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCAt                                 <  1:826270/271‑1 (MQ=255)                                                                                                                                                                                                                                      aCTTCTACGGCAGGAATTCCTGCTGTTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTACCGAATGGCACCGATTCATCACCTCTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTTGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCAt                                 <  1:1076651/272‑1 (MQ=255)                                                                                                                                                                                                                                      aCTGCTACGTCAGTAATTTCTGCTGGTGATTATGGGGGGCGTGTTCGTTGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCAt                                 <  1:526967/272‑1 (MQ=255)                                                                                                                                                                                                                                          cTACGTCATGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCATTATc                             <  1:692383/272‑1 (MQ=255)                                                                                                                                                                                                                                                    aaTTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGcc                   <  1:413901/272‑1 (MQ=255)                                                                                                                                                                                                                                                            ctgGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACGACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAACGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTTGCAACGCTGTAGGTCAGTTAATCATGGCTGATTCTCGGGGTACAAATGTTGTCATTATCGTGCTggggttctccgtg           >  2:685996/1‑262 (MQ=255)                                                                                                                                                                                                                                                                      gggggggggtGTgaagtgctggggatttttgagcgtggggaagaaaagagggatgccatgcagtcgttgcttttaccgccacctgtgcagcaggcactggcaaaagcagcgcttacgtatcgctttggtgaggaccaccagccggttactgaatcgcagatactctccccacgccgctggcaggatgagagcaatgacctttggaccacctatcagcggattcaagaaaacctgattaagggcggactcagtgggcgtaatgctaaaggcg  <  2:391705‑M1/270‑260 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                    ATTTGTCGCCGGTGGTTTTGCGCTGGTGGCGTGGGCGACCGGCAATATGAACTTTGCCAGCTACTTGCATATACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGA‑TGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAATCATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGC  >  NC_000913/96619‑97149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.