New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 96890	35 (0.530)	3 (0.050)	3/326	NT	7.2%	coding (889/1083 nt)	mraY	phospho‑N‑acetylmuramoyl‑pentapeptide‑ transferase
	?	NC_000913	2769127 =	43 (0.660)					coding (463/822 nt)	yfjQ	CP4‑57 prophage; protein YfjQ

TTGCCTGTCAGACACGGGTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCAT  >  NC_000913/2768861‑2769396                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                              ttGCCTGTCAGACACGGGTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGGCGTTTGGCGGGGTGCGGGTTCCACACAAGGGGGATGGGGGGAGGGAGGTTATGTAGGGGGGGTGTGGAGTg                                                                                                                                                                                                                                                                          >  2:118405/1‑272 (MQ=255)                              cgtcgtcgtGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCCGATGCTGCCGGTCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTAGGAAGTGCTGGGGATTTTTGAGCGTGTGgaagaata                                                                                                                                                                                                                                             >  1:438779/1‑270 (MQ=255)                                                         ctgcGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACACGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATGTTTGAGCGTGTGGAAGAAAAGCGGGAGGCCATGCAGTCGTTGCtttt                                                                                                                                                                                                                  >  1:4456/1‑272 (MQ=255)                                                          tgcGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACACGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGGGGACGAAAAGAGGGATGCAATGCATCCGCTGCTTTTa                                                                                                                                                                                                                 >  1:404401/1‑272 (MQ=255)                                                              ccTATGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGc                                                                                                                                                                                                             <  1:975100/272‑1 (MQ=255)                                                                tACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTAGCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGGGGAAGAAAGGGGGGATGGCAGGCAGTGGTTggtctgttcctta                                                                                                                                                                                                           >  2:340985/1‑260 (MQ=21)                                                                tACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTACCGCGCACGTTCAGGCCGGTGTGCCAGAACGGTCTGGTCTGAGGCGAGTCGTTTGGCGAGGTGCGGGTGCCCCACAAGGGGGATGTGGTGAGTACGGTTATTGAGGGGGAGGATGAAg                                                                                                                                                                                                                                                                            >  1:991078/1‑207 (MQ=25)                                                                 aCGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTAGCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGcc                                                                                                                                                                                                                                   <  1:340986/247‑1 (MQ=255)                                                                      gggAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAg                                                                                                                                                                                                                             <  1:598661/248‑1 (MQ=255)                                                                                          aaaCAGGTTCCGGAAAGTATCCTGCTAAACTCTTACGATGGCACGAGTGCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCAGACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAag                                                                                                                                                                                  <  1:534291/271‑1 (MQ=255)                                                                                                                ttcTTCACCCTCACGGTGGCACCAGTTCGTGCCGGGGGCTGCCGGGCATGTTCAGGGGGGTGGGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGCTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGt                                                                                                                                                           <  2:404400/270‑1 (MQ=25)                                                                                                                      aCTCTTTCGATGGCACCAGTTCGTACCAGATGCTTCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACAC‑AGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGac                                                                                                                                                     <  1:1049463/271‑1 (MQ=255)                                                                                                                               aTGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCg                                                                                                                                                                                                              >  1:738216/1‑206 (MQ=255)                                                                                                                                tGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGc                                                                                                                                                                                                             <  2:738215/206‑1 (MQ=255)                                                                                                                                                                          ggTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGGTGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATg                                                                                                                                                                                                                                     >  1:1121960/1‑140 (MQ=255)                                                                                                                                                                          ggTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATg                                                                                                 >  1:380172/1‑272 (MQ=255)                                                                                                                                                                           gtgtGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGc                                                                                                                                                                                                                                    <  2:1121959/140‑1 (MQ=255)                                                                                                                                                                               gCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAag                                                                                                                                                                                                                                            >  2:602161/1‑128 (MQ=255)                                                                                                                                                                               gCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCg                                                                                                                                                                                                              >  2:824714/1‑158 (MQ=255)                                                                                                                                                                               gCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCAc                                                                                                                                                                                           >  1:344647/1‑177 (MQ=255)                                                                                                                                                                               gCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGagag                                                                                             >  1:391706/1‑271 (MQ=255)                                                                                                                                                                               gCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGC‑TTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTAt                                                                                                                                                                    >  1:385451/1‑199 (MQ=255)                                                                                                                                                                                ccAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAaga                                                                                                                                                                                                                                           <  1:602162/128‑1 (MQ=255)                                                                                                                                                                                ccAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGc                                                                                                                                                                                                             <  1:824715/158‑1 (MQ=255)                                                                                                                                                                                ccAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACt                                                                                                                                                                                          <  2:344646/177‑1 (MQ=255)                                                                                                                                                                                ccAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGC‑TTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATc                                                                                                                                                                   <  2:385450/199‑1 (MQ=255)                                                                                                                                                                                                     cgAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGGTTTTTGAGCGGGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCCGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGGTa                                                                                                                                        >  1:1099059/1‑206 (MQ=255)                                                                                                                                                                                                          cGTTTGGCGAGGTGCGGGTGCCACACAAAGGGGATGTGGGGGGTCAGGGTATTGGGGGGGCGGATGGAGTGGTGGGGATTTTTGGGCGTGTGGGAGAAAAGAGGGATGCCATGCAGGCGTTGGTTTTACCGCCACCTGTgcagca                                                                                                                                                                                                >  1:220018/1‑145 (MQ=21)                                                                                                                                                                                                           gTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGcagcag                                                                                                                                                                                               <  2:220018/145‑1 (MQ=255)                                                                                                                                                                                                               taggcattatcgccgtactgctacgtcaggaattcctgctggtgattatggggggcgtgtGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAAt                                                                                                                                  >  1:434427‑M2/61‑202 (MQ=255)                                                                                                                                                                                                                aggcattatcgccgtactgctacgtcaggaattcctgctggtgattatggggggcgtgtGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATc                                                                                                                                 <  2:434426‑M2/143‑1 (MQ=255)                                                                                                                                                                                                                                 cacaAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTAt                                                                                                                                                                    >  2:636894/1‑150 (MQ=255)                                                                                                                                                                                                                                  acaAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATc                                                                                                                                                                   <  1:636895/150‑1 (MQ=255)                                                                                                                                                                                                                                  acaAGGGGGATGTGGGGAGTACGGTTATTGAGGGGGCGTATGAAGCGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGc                                                                                            <  1:887374/221‑1 (MQ=255)                                                                                                                                                                                                                                         ggATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGtt                                                                                                                                                                                                                        >  2:1017203/1‑90 (MQ=255)                                                                                                                                                                                                                                          taTGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTg                                                                                                                                                                                                                       <  1:1017204/89‑1 (MQ=255)                                                                                                                                                                                                                                                     tCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGgaag                                                                                                                                                                                                                                                 >  1:910446/1‑53 (MQ=255)                                                                                                                                                                                                                                                     tCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCg                                                                                                                                                                                                              >  2:762621/1‑88 (MQ=255)                                                                                                                                                                                                                                                      cAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGgaaga                                                                                                                                                                                                                                                <  2:910445/53‑1 (MQ=255)                                                                                                                                                                                                                                                      cAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCg                                                                                                                                                                                                              >  1:820383/1‑87 (MQ=255)                                                                                                                                                                                                                                                      cAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGc                                                                                                                                                                                                             <  1:762622/88‑1 (MQ=255)                                                                                                                                                                                                                                                      cAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCAGGCCGCTGGCAGGGTCAGAGCAATGACCTTTGGACCACCTATCACCTGATTCAAGAAAACCTGAACAAGGGCGTGCCCAGTgggactcaagg                     >  2:145693/1‑264 (MQ=255)                                                                                                                                                                                                                                                       aGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGc                                                                                                                                                                                                             <  2:820382/87‑1 (MQ=255)                                                                                                                                                                                                                                                           tATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCa                                                                                                                                                                                      >  1:291445/1‑106 (MQ=255)                                                                                                                                                                                                                                                            aTTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCaa                                                                                                                                                                                     <  2:291444/106‑1 (MQ=255)                                                                                                                                                                                                                                                              gagggggggGTATGAGGTGCTGGGGTTTTTTGGGCGTGGGGAAGAAAAGAGGGAGGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGc              <  2:380171/268‑1 (MQ=255)                                                                                                                                                                                                                                                               gggggggggtgtGAAGTGCTGGGGATTTTTGAGCGTGGGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCg             <  2:391705‑M2/259‑1 (MQ=255)                                                                                                                                                                                                                                                                     gCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTa                                                                                                                                                                         >  2:1041113/1‑109 (MQ=255)                                                                                                                                                                                                                                                                      cGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTCCGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGAAGAGAGCCATGAACTGTGGGCCACCTAGCCGGGGAATCAAGAAAACCGGCTTAAAGGCGGACTCAGTGGGCGTAATGGCAAAgagggcactagc     >  2:236659/1‑261 (MQ=255)                                                                                                                                                                                                                                                                      cGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTAc                                                                                                                                                                        <  1:1041114/109‑1 (MQ=255)                                                                                                                                                                                                                                                                         aTGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCGTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCAt  <  1:236659/272‑1 (MQ=255)                                                                                                                                                                                                                                                                           gAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGc                                                                                            >  2:209202/1‑180 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                              TTGCCTGTCAGACACGGGTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCAT  >  NC_000913/2768861‑2769396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.