Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 238,217 IS1 (+) +9 bp intergenic (+97/+32) yafT → / ← ykfM lipoprotein YafT/uncharacterized protein YkfM

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 238217 =1 (0.000)429 (1.290) 169/194 0.0 99.7% intergenic (+97/+40) yafT/ykfM lipoprotein YafT/uncharacterized protein YkfM
?NC_000913 257908 = NA (NA)noncoding (768/768 nt) IS1 repeat region
* ? NC_000913 = 2382251 (0.000)381 (1.140) 164/194 0.0 99.7% intergenic (+105/+32) yafT/ykfM lipoprotein YafT/uncharacterized protein YkfM
?NC_000913 = 258675 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 381 total aligned reads displayed.

TATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/238126‑238225
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  NC_000913/258675‑258577
                                                                                                                                                                                                       
TATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGG                                                                                                    >  1:36046/1‑101
 ATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGG                                                                                                   <  2:406619/101‑1
  TATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGG                                                                                                   >  2:36096/1‑100
  TATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGG                                                                                                    >  2:35868/1‑99
   ATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTTACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTG                                                                                                 >  1:36598/1‑101
   ATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTG                                                                                                 >  1:36088/1‑101
   ATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTG                                                                                                 >  1:35675/1‑101
     CTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGAT                                                                                               >  2:35744/1‑101
     CTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGAT                                                                                               <  2:406593/101‑1
         CGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTG                                                                                           >  2:35839/1‑101
         CGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTG                                                                                           >  2:37037/1‑101
          GCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGC                                                                                          >  1:36143/1‑101
           CCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCC                                                                                         >  1:36938/1‑101
            CAGGAATTTGTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCA                                                                                        <  2:406645/101‑1
            CAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCA                                                                                        >  2:35908/1‑101
            CAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCA                                                                                        >  1:36537/1‑101
             AGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAA                                                                                       >  1:35848/1‑101
             AGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAA                                                                                       >  2:36787/1‑101
              GGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAAC                                                                                      <  2:406474/101‑1
              GGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAAC                                                                                      <  2:406530/101‑1
              GGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAAC                                                                                      <  1:406521/101‑1
                  TTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTA                                                                                   <  2:406601/100‑1
                    TCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTG                                                                                >  1:35974/1‑101
                    TCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTG                                                                                >  1:36341/1‑101
                      TGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGAT                                                                              >  1:36070/1‑101
                        GCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACT                                                                                 <  1:406703/96‑1
                         CGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTA                                                                           <  1:406791/101‑1
                         CGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTA                                                                           >  2:36444/1‑101
                           GCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGT                                                                         <  2:406776/101‑1
                           GCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGT                                                                         <  1:406772/101‑1
                             AATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGC                                                                                             <  1:406681/79‑1
                               TAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTAT                                                                     <  1:406723/101‑1
                                AATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                    <  1:406761/101‑1
                                 ATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGA                                                                   <  2:406769/101‑1
                                  TACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                                  >  1:36230/1‑101
                                   ACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                 <  1:406553/101‑1
                                   ACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                 >  1:35189/1‑101
                                     AAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                               <  1:406740/101‑1
                                     AAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                               <  1:406655/101‑1
                                      AAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                              <  2:406741/101‑1
                                       AATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGT                                                             >  2:36010/1‑101
                                         TTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                           >  2:36633/1‑101
                                          TCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                          <  1:406464/101‑1
                                           CTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                                         >  2:35893/1‑101
                                           CTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                                         >  1:35870/1‑101
                                           CTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                                         >  1:35699/1‑101
                                              TGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                      <  1:406590/101‑1
                                               GCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT                                                         <  2:406691/97‑1
                                                CATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                    <  1:406630/101‑1
                                                CATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT                                                    >  2:36057/1‑101
                                                 ATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                   <  1:406369/101‑1
                                                 ATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                   >  2:36338/1‑101
                                                 ATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                   >  2:36241/1‑101
                                                 ATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                   <  1:406717/101‑1
                                                 ATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                   >  1:35901/1‑101
                                                   AAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT                                                 >  2:36350/1‑101
                                                    AGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                                >  2:36531/1‑101
                                                    AGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                                >  1:36265/1‑101
                                                      AAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA                                              >  1:35483/1‑101
                                                       AATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                             >  2:36180/1‑101
                                                         TTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                           >  1:35797/1‑101
                                                         TTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG                                           <  1:406495/101‑1
                                                          TTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG                                          >  2:35948/1‑101
                                                           TTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC                                         <  2:406707/101‑1
                                                            TTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                        >  1:35925/1‑101
                                                            TTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                        <  2:406759/101‑1
                                                             TCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                                       <  2:406754/101‑1
                                                             TCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGCGCTCCA                                              >  2:35257/1‑94
                                                              CTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                      <  2:406634/101‑1
                                                               TTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT                                     >  2:35517/1‑101
                                                                   CAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                 >  2:35977/1‑101
                                                                   CAAAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                 >  1:35561/1‑101
                                                                     AAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                               >  2:35781/1‑101
                                                                     AAGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                               >  2:35636/1‑101
                                                                      AGACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                              >  1:36373/1‑101
                                                                        ACAGTGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                                       >  2:3311712/1‑90
                                                                            TGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT                        <  2:406657/101‑1
                                                                            TGCAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT                        >  1:3311696/1‑101
                                                                              CAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT                      <  2:406716/101‑1
                                                                              CAAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGT                      <  2:406668/101‑1
                                                                               AAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     <  1:406752/101‑1
                                                                               AAGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     <  2:406747/101‑1
                                                                                AGAAAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC                    >  1:3311962/1‑101
                                                                                   AAGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                 >  1:3311850/1‑101
                                                                                    AGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                >  2:3311759/1‑101
                                                                                    AGGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                >  2:3311926/1‑101
                                                                                     GGACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT               <  1:406783/101‑1
                                                                                       ACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT             >  1:3311462/1‑101
                                                                                       ACATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT             >  1:3312159/1‑101
                                                                                         ATGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC           <  1:406689/101‑1
                                                                                          TGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA          <  1:406671/101‑1
                                                                                          TGGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA          >  2:3312106/1‑101
                                                                                           GGAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAG         >  1:3311564/1‑101
                                                                                            GAATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTCTGATGGTG                                                              >  2:3311967/1‑47
                                                                                              ATCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTA      <  2:406730/101‑1
                                                                                               TCCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC     >  1:3311913/1‑101
                                                                                                CCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT    <  1:406549/101‑1
                                                                                                CCGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACT    >  1:3311763/1‑101
                                                                                                 CGGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG   <  2:406788/101‑1
                                                                                                  GGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  >  1:3311806/1‑101
                                                                                                                                                                                                       
TATATCTGCCGCCAGGAATTTCTGGCGGCAATAATACAAAATTCTTTGCATAAGAAATTTTTCTTGACAAAGACAGTGCAAGAAAGGACATGGAATCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/238126‑238225
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  NC_000913/258675‑258577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.