| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 883,553 | IS30 (+) +2 bp | intergenic (‑165/‑119) | ybjG ← / → mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 270541 = | NA (NA) | 148 (3.280) | 44/134 | 0.0 | 100% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 883554 | 0 (0.000) | intergenic (‑166/‑119) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter | |||||
| * | ? | NC_000913 | 883553 = | 0 (0.000) | 154 (3.420) | 42/134 | 0.0 | 100% | intergenic (‑165/‑120) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| ? | NC_000913 | = 1470516 | NA (NA) | noncoding (1221/1221 nt) | IS30 | repeat region | |||||
Only 100 of 154 total aligned reads displayed.
GAGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883619‑883553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < NC_000913/1470516‑1470450 GAGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACT < 1:960104/68‑1GAGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACT < 1:237471/68‑1 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTACGCACATTCTTACATTCTTACGAGTATAGCTGCTG > 1:2570263/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:1990549/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:1795772/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:472284/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:492327/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:241320/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG < 1:2416057/68‑1 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:2340334/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:90781/1‑68 AGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTG > 1:2246603/1‑68 AAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAG < 1:354507/68‑1 GCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGAT > 1:841651/1‑68 GCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGAT > 1:3228592/1‑68 GCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGAT > 1:3133136/1‑68 TTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAAT < 1:51547/68‑1 TTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAAT < 1:3103007/68‑1 TTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCCATC > 1:739224/1‑68 TTGCAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCT > 1:170355/1‑68 TGTAGCTGAAACCACGGTTAAGCGCATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTG < 1:2166914/68‑1 TGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTG < 1:2157608/68‑1 GTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:3230704/68‑1 GTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:541572/68‑1 GTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:2815345/68‑1 GTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:813239/68‑1 CTGAGACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCGGTCAAT < 1:2147535/68‑1 CTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:3135658/68‑1 CTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:2669121/68‑1 TGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATG < 1:3014252/68‑1 TGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATG > 1:962115/1‑68 TGAAACCACGG‑TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGC < 1:1060948/68‑1 GAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGC < 1:2950215/68‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA < 1:2696457/68‑1 CCACGGTTAAGCACATTCTTACATTATTACGAGTATCGCTACTGTAGATTCAATCTGTCAATGCAACA > 1:2560226/1‑68 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACA > 1:2884275/1‑68 CACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACAC < 1:2744557/68‑1 CACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACAC < 1:78303/68‑1 GGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2802432/68‑1 GGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:812108/68‑1 GGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2878863/68‑1 GGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1579649/68‑1 GGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:2532142/68‑1 GGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1842125/68‑1 GTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCT > 1:1694477/1‑68 AGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:97571/68‑1 AGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:662453/1‑68 AGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:306415/68‑1 GCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAA > 1:1217319/1‑68 GCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAA < 1:830807/68‑1 GCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAA < 1:3557917/68‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:72913/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:334087/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:862941/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:1199650/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:651241/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:3103324/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:440155/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:1978134/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:2059269/1‑68 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATT > 1:1253551/1‑68 TCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCTCTGTCTCTTATac > 1:79667/1‑66 TCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCT > 1:3323903/1‑68 TTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCT < 1:501423/68‑1 TTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCT < 1:1444452/68‑1 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTT > 1:3405377/1‑68 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCG > 1:1877094/1‑68 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCG > 1:1345976/1‑68 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCG > 1:1961866/1‑68 CGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTT < 1:1060319/68‑1 GAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTG > 1:295056/1‑68 AGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCGATTATCTCTTTCGGTGTTTTGA < 1:741455/68‑1 AGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGA < 1:402461/68‑1 AGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGA < 1:1598050/68‑1 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAA > 1:642328/1‑68 ATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:1152324/68‑1 AGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTC < 1:601286/68‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCA > 1:3478137/1‑68 ctcCTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:1360306/4‑68 CTACTGTAGATTCAATCTGTCAATGCAATACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:1444252/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATTTCTTTCGGTGTTTTGAACTTCAG > 1:3509764/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:4295/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:3416100/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:1945381/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:1255037/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:2782568/1‑68 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGCGTTTTGAACTTCAG > 1:2231473/1‑68 CTACTANAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAG > 1:2098282/1‑68 TACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGT < 1:1949381/68‑1 ACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTG < 1:1603555/68‑1 ACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTG > 1:1806798/1‑68 ACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGCGTTTTGAACTTCAGTG > 1:3487968/1‑68 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:251045/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:1107756/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:261918/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:2058549/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:3395882/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:3433706/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < 1:405297/68‑1 CTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTGTCGGTGTTTTGAACTTCAGTGT < 1:2351605/68‑1 GAGAAAGCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883619‑883553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGT < NC_000913/1470516‑1470450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |