| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,025 | IS1 (–) +9 bp | coding (265‑273/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 279163 = | NA (NA) | 60 (1.510) | 33/128 | 0.0 | 98.1% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 486033 | 1 (0.030) | coding (273/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 53 (1.330) | 27/128 | 0.1 | 97.9% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 486025 = | 1 (0.030) | coding (265/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/279224‑279163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCA < NC_000913/486033‑485970 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTC > 1:2025828/1‑65 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTC < 1:289557/65‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTC < 1:2852913/65‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTC < 1:273250/65‑1 GACAAAGTCATAGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTC < 1:692629/65‑1 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTGTCTct > 1:1734692/1‑63 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTA > 1:580593/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTA > 1:2967938/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTA > 1:1293527/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTA > 1:2588050/1‑65 TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATAC < 1:483981/65‑1 TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATAC > 1:1335230/1‑65 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGA < 1:955970/65‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGA > 1:661735/1‑65 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGA < 1:1291975/65‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAG > 1:901022/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAG > 1:592559/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAG > 1:2852184/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAG < 1:1489826/65‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAG > 1:374098/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATATTGAGAGTGGATCG > 1:3044165/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCc > 1:1273218/1‑64 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCG > 1:1551300/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCG > 1:3237003/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCG > 1:2307731/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCG > 1:537090/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCG > 1:581989/1‑65 TCTGAACATAAAACACTATCAATAAGCTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCG > 1:2161674/1‑65 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCctg > 1:2057984/1‑62 CATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGG > 1:45640/1‑65 ATAAAACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGc > 1:767249/1‑64 AAACACTATCAATAAGTTGGAGTCATTACCCTCTCCTAATACTGAGAGTGGATCGCCAGGGAATT > 1:325399/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGACTTTT > 1:2372184/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTT > 1:2242420/1‑65 CACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTG > 1:1232168/1‑65 ACTATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGC > 1:239760/1‑65 ACTATCAATAAGTTGGAGGCATTACCCTCTCTTAATACTGAGAGTGGATCGCCGGGGGATTTTcc > 1:2605847/1‑63 TATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCT < 1:2753314/65‑1 TATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCT < 1:916793/65‑1 ATCAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGAGGATCCCCAGGGAATTTTGCCTc > 1:2837039/1‑64 CAATAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGAT < 1:2256929/65‑1 TAAGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACT > 1:1875547/1‑65 AGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCA > 1:2513282/1‑65 AGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCA > 1:55980/1‑65 AGTTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCA > 1:1272213/1‑65 TTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAG < 1:239791/65‑1 TTGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAG > 1:921803/1‑65 TGGAGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGC < 1:624929/65‑1 AGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCT < 1:1763144/65‑1 AGTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCT > 1:176657/1‑65 GTCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTA > 1:654755/1‑65 TCATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAG > 1:1988457/1‑65 ATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTT < 1:560886/65‑1 ATTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTT < 1:134561/65‑1 TTACCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTC > 1:2461783/1‑65 CCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACC > 1:104519/1‑65 CCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACC < 1:1085734/65‑1 CCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACC > 1:2242366/1‑65 CCCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACC > 1:1970796/1‑65 CCTCTCTTAATACTGAGAGTGGATCCCCAGGGAATTTTGCCTGATACCCAAGCTCCAGTTCACCA > 1:2042538/1‑65 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/279224‑279163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCA < NC_000913/486033‑485970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |