| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 883661 = | 8 (0.160) | 58 (1.160) | 31/134 | 0.1 | 87.9% | intergenic (‑273/‑12) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| ? | NC_000913 | = 883666 | NA (NA) | intergenic (‑278/‑7) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter | |||||
GGAAAAGTAACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883727‑883661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGAAAGCGAATTTTGTAG < NC_000913/883666‑883601 GGAAAAGTAACGCCTGGCGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGT < 1:333143/68‑1GGAAAAGTAACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGT < 1:2594689/68‑1 AAAAGTAACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCT > 1:3782419/1‑68 GTAACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGC > 1:2283829/1‑68 GTAACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGC > 1:780231/1‑68 AACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGACA > 1:4064286/1‑68 ACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAA < 1:1800959/68‑1 CGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAAT > 1:3238112/1‑68 GCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATA > 1:40391/1‑68 GCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATA < 1:779504/68‑1 GCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATA > 1:100636/1‑68 CCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCCATAA > 1:2703011/1‑68 CCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAA > 1:1415341/1‑68 CCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAA > 1:1599051/1‑68 CCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAA > 1:1329312/1‑68 CCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAA > 1:1114312/1‑68 CTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAAT > 1:1059062/1‑68 TGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATA < 1:997882/68‑1 TGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATA < 1:196862/68‑1 CGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATC > 1:3198661/1‑68 CGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATC > 1:2168706/1‑68 CGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATC > 1:2177236/1‑68 TCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGC < 1:1440941/68‑1 TCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGC > 1:3514613/1‑68 GCCTGGCCCCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA < 1:336852/68‑1 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA > 1:1983087/1‑68 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA < 1:1653597/68‑1 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA < 1:3511058/68‑1 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA < 1:3147516/68‑1 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA > 1:2813522/1‑68 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA > 1:2805463/1‑68 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA < 1:3967316/68‑1 GCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGA > 1:549560/1‑68 CCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAG > 1:1589583/1‑68 TGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTT < 1:230374/68‑1 CACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGCGTTTAA > 1:3722428/1‑68 CACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAA > 1:2726637/1‑68 ACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAAT > 1:1088112/1‑68 GAAGCTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAA > 1:111899/1‑68 CTAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGC > 1:988673/1‑68 TAATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCA < 1:2645084/68‑1 ATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGC < 1:3193883/68‑1 ATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGC < 1:2124271/68‑1 ATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGC < 1:3877040/68‑1 ATTTATTTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGC < 1:3480572/68‑1 TTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGA > 1:3788858/1‑68 TTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGA > 1:1831677/1‑68 TTTGCATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGA > 1:1424548/1‑68 ATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAG < 1:284629/68‑1 ATGCAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAG < 1:1295506/68‑1 CAATTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGA < 1:993406/68‑1 TTTCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATT < 1:2896788/68‑1 TCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATTTT < 1:3185640/68‑1 TCTTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATTTT < 1:922520/68‑1 TTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATTTTGT > 1:1823998/1‑68 TTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATTTTGT > 1:3834350/1‑68 TTCGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATTTTGT > 1:2114196/1‑68 CGTCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGCAAGCGAATTTTGTAG > 1:1785864/1‑68 GGAAAAGTAACGCCTGACGTCCAAGCCTGGCACCGGAAGCTAATTTATTTTGCATGCAATTTCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883727‑883661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTCGCCAATAATAATCGCGCAGAGTTTAATAAAAGCGCAGCTAACGAGAAAGCGAATTTTGTAG < NC_000913/883666‑883601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |