| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 485,865 | IS1 (+) +8 bp | coding (105‑112/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 279163 = | NA (NA) | 49 (1.180) | 22/128 | 0.2 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 485865 = | 0 (0.000) | coding (105/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | = 291401 | NA (NA) | 43 (1.030) | 23/128 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 485872 | 0 (0.000) | coding (112/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291341‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATCGAG < NC_000913/485872‑485809 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAT < 1:3365605/65‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCCAATCT > 1:3269650/1‑65 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCC > 1:1138792/1‑65 GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCC > 1:425246/1‑65 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAG > 1:1535396/1‑65 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAG > 1:3311673/1‑65 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGA > 1:1606396/1‑65 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAG < 1:764938/65‑1 AAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGG < 1:2460718/65‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGG < 1:1500632/65‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGG < 1:1074895/65‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGAT < 1:3081782/65‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGAT < 1:3008757/65‑1 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGA > 1:687222/1‑65 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATAC < 1:2494358/65‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATAC < 1:411990/65‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATAC < 1:2117946/65‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCC < 1:954342/65‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCT > 1:2969883/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:3105255/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:921449/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:1390357/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:547801/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:35085/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:1790005/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:2359066/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:2693399/1‑65 ACTAAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTG > 1:2701894/1‑65 AAATCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGA < 1:1511996/65‑1 TCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAA > 1:2309436/1‑65 TCAGTAAGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAA > 1:1160873/1‑65 AGTTGGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACG > 1:2984686/1‑65 GGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGA < 1:1749554/65‑1 GGCAGCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGA < 1:16939/65‑1 GCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCA < 1:2380311/65‑1 GCATCACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCA > 1:2884806/1‑65 ATCACCCAACCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACA < 1:1896061/65‑1 CACCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATC < 1:768971/65‑1 CCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATCGA < 1:2001930/65‑1 CCCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGGAGAGCCACATCGA < 1:2039149/65‑1 CCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATCGAG > 1:3263299/1‑65 CCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATCGAG > 1:2231170/1‑65 CCAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATAGAG > 1:1754929/1‑65 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291341‑291401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATCTCGCCCAGCGAGGTGGATGATACCCCCTGCTGTGAGAAAAGACGTAGAGCCACATCGAG < NC_000913/485872‑485809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |