| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 883,553 | IS30 (+) +2 bp | intergenic (‑165/‑119) | ybjG ← / → mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 270541 = | NA (NA) | 62 (1.490) | 30/128 | 0.1 | 98.4% | noncoding (1/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | = 883554 | 1 (0.020) | intergenic (‑166/‑119) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter | |||||
| * | ? | NC_000913 | 883553 = | 1 (0.020) | 62 (1.490) | 25/128 | 0.1 | 98.4% | intergenic (‑165/‑120) | ybjG/mdfA | undecaprenyl pyrophosphate phosphatase/multidrug efflux pump MdfA/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| ? | NC_000913 | = 1470516 | NA (NA) | noncoding (1221/1221 nt) | IS30 | repeat region | |||||
GCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883613‑883553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCA < NC_000913/1470516‑1470454 GCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTA < 1:3265834/65‑1 CGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAG < 1:2047259/65‑1 GAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGA < 1:1526890/65‑1 GAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGA < 1:2359740/65‑1 TTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCA > 1:3023478/1‑65 GCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGT < 1:1963757/65‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:2717927/65‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:2680611/65‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:16869/65‑1 AAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAAT < 1:2428535/65‑1 ACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGC > 1:2414319/1‑65 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA > 1:1812382/1‑65 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA > 1:1383435/1‑65 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA < 1:245150/65‑1 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA > 1:1714775/1‑65 CCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCA < 1:1777694/65‑1 GTTAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACC > 1:963065/1‑65 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1765707/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1851024/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:3259977/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1521593/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:849356/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1302936/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1385858/65‑1 TAAGCACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCC < 1:1394810/65‑1 cagTTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:1811985/62‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:544027/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA < 1:876315/65‑1 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:690670/1‑65 ACATTCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCA > 1:130912/1‑65 TCTTACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTA > 1:750216/1‑65 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTTNCTC > 1:2145802/1‑65 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCcc > 1:899388/1‑63 ACATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTANCTC > 1:2145809/1‑65 CATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCT < 1:1938208/65‑1 ATTATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTT > 1:221898/1‑65 TATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTC > 1:58990/1‑65 TATTACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTC > 1:524358/1‑65 TACGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGT < 1:3094125/65‑1 CGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGT < 1:719107/65‑1 CGAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGT < 1:1209958/65‑1 GAGTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATTTCTTTCGGTGTT > 1:100549/1‑65 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTT > 1:3185006/1‑65 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTT < 1:1412784/65‑1 GTATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTT > 1:606062/1‑65 ATAGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGA > 1:2718491/1‑65 AGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAAC > 1:1338474/1‑65 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:1522838/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT > 1:756506/1‑65 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:234624/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:2545220/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:659094/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:586760/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT < 1:3272518/65‑1 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT > 1:1180215/1‑65 GCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACT > 1:2903583/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:1299918/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:695258/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:2891030/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:1975460/1‑65 CTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTT > 1:1921841/1‑65 ACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGCGTTTTGAACTTCA > 1:3058989/1‑65 GCGAATTTTGTAGCTGAAACCACGGTTAAGCACATTCTTACATTATTACGAGTATAGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/883613‑883553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCA < NC_000913/1470516‑1470454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |