| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 486,025 | IS5 (+) +4 bp | coding (265‑268/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 275149 | NA (NA) | 70 (1.710) | 26/132 | 0.1 | 98.5% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 486028 | 1 (0.030) | coding (268/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | 486025 = | 1 (0.030) | 51 (1.230) | 27/134 | 0.1 | 98.0% | coding (265/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR |
| ? | NC_000913 | 574591 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 103 total aligned reads displayed.
GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/275082‑275149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAATATTGGA < NC_000913/486028‑485962 GNTGAACCCTGTTNTATGGCTNCAGATGACGAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:424404/68‑1GATGAGCCCTGTTGTGTGGCTTCAGATGGCAAACATGATCTCATATCAGGGACGTGTTCGCACCTTCC < 1:2587812/68‑1GATGAATCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:979361/68‑1GATGAACCCTGTTCTATGGCTCCAGATTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:2809712/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:2812604/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1109072/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:2827413/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:2858779/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:3033908/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1718601/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1731353/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:3051398/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:307963/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:3214076/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1854654/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1994014/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1871541/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1532102/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1128717/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1508701/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:2533045/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:623473/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:975466/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1399480/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:691889/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1232266/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:1224155/68‑1GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC < 1:772103/68‑1 ATGAACCCTGTTCTATGGCTCCCGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCCTCCT > 1:1541627/1‑68 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT > 1:2374862/1‑68 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT > 1:1189226/1‑68 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT > 1:1689758/1‑68 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT < 1:545884/68‑1 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT > 1:557823/1‑68 cagACCCTGTTCTATGGCTCCAGATGACAAACATGATCTTATATCAGGGACTTGTTCGCACCTTCCTT < 1:177484/65‑1 TGAACCCTGTTCTATGGCTCCAGATGACACAAAAGATCTCATATCAGGGACCTGTTCGCACCTTCCTT > 1:2605985/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTTATATCAGGGACTTGTTCGCACCTTCCTT > 1:3317666/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:1864342/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:150335/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:602493/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:501710/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:1842759/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:2071532/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:403560/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACATTCCTT > 1:3213231/1‑68 TGAACCCTGTTCTATGGCTCCAGACGACAAACATGATCTCACATCAGGGACTTGTTCGCACCTCCCTT > 1:2599747/1‑68 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTcg > 1:1475131/1‑66 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAA > 1:2126761/1‑68 ACCCTGTTCTCTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAT > 1:1632762/1‑68 ACCCTGTTCTATGGCTCCAGATGACAAAAATGATCTCATATTAGGGACTTCATCGCACCTTCCTTAAT > 1:1620694/1‑68 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATA > 1:1633641/1‑68 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATA > 1:1488461/1‑68 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATAC < 1:3164911/68‑1 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATAC > 1:465313/1‑68 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATAC > 1:336049/1‑68 TTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAG < 1:1111245/68‑1 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGA > 1:2083079/1‑68 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGA > 1:1962055/1‑68 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGA > 1:2362917/1‑68 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGA > 1:1571111/1‑68 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATAGTGAGAGTG < 1:3210399/68‑1 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGA > 1:2777569/1‑68 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGA > 1:1723689/1‑68 CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCC < 1:2462378/68‑1 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTT > 1:1212736/1‑68 AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCCCCAGGGAATTT > 1:2516470/1‑68 TGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCC > 1:3360874/1‑68 ATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTG > 1:271114/1‑68 TCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTct > 1:1934526/1‑66 TCTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGA > 1:253136/1‑68 CTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGAT < 1:1439646/68‑1 CTCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGAT < 1:2492487/68‑1 TCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATA > 1:2648938/1‑68 TCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATA > 1:427575/1‑68 TCATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATA > 1:297261/1‑68 CATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATAC < 1:3162949/68‑1 CATATCAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGAGCGCCAGGGAATTTTGCCTGATAC < 1:2224384/68‑1 CAGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAG < 1:3202463/68‑1 AGGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGC < 1:382912/68‑1 GGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGCTACTCAAGCT > 1:1334185/1‑68 GGGACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCT > 1:182398/1‑68 GACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCT < 1:167029/68‑1 ACTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTA > 1:3132274/1‑68 CTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAG > 1:2125853/1‑68 CTTGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGATCTAG > 1:1150531/1‑68 TGTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTT > 1:526582/1‑68 GTTCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTNTAGTTC > 1:2161135/1‑68 TCGCACCTTCCTTAATACTGAGAGTGGATCGGCAGGGGATTTTGCCTGATACTCAAGCTCTAGTTCAC > 1:2964801/1‑68 TCGCACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCAC > 1:78061/1‑68 ACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCTTGATACTCAAGCTCTAGTTCACCAAT < 1:44202/68‑1 ACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAAT < 1:691142/68‑1 ACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAAT < 1:734057/68‑1 ACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAAT < 1:2594483/68‑1 ACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAAT < 1:1177572/68‑1 ACCTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAAT > 1:2668081/1‑68 CTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAATAT < 1:2236370/68‑1 CTTCCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAATAT < 1:156340/68‑1 CTTAATACTGAGAGTGGATTGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAATATTGGA < 1:2963410/68‑1 CTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAATATTGGA > 1:2078960/1‑68 CTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGTCACCAATATTGGA < 1:322579/68‑1 GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/275082‑275149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGTTCACCAATATTGGA < NC_000913/486028‑485962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |