| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,619,100 | Δ20 bp | intergenic (‑192/‑1) | marC ← / → marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1619100 | 1619119 | 20 | 83 [0] | [0] 82 | marC/marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1619099 | 0 (0.000) | 72 (2.000) | 30/116 | 0.0 | 100% | intergenic (‑191/‑21) | marC/marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| ? | NC_000913 | 1619120 = | 0 (0.000) | coding (1/435 nt) | marR | DNA‑binding transcriptional repressor MarR | |||||
AGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1619026‑1619099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATC > NC_000913/1619120‑1619186 AGCCAAACGTGGCATCCGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCA < 1:1894223/68‑1AGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCA < 1:2657142/68‑1AGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCA < 1:265219/68‑1 CAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAAC > 1:2626675/1‑68 AAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACT > 1:759374/1‑68 ACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAAT > 1:460678/1‑68 CGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATG < 1:1695032/68‑1 GCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTATTGTGAA > 1:2899744/1‑68 ATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAA > 1:915939/1‑68 TCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAG > 1:2302118/1‑68 CGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGT < 1:2502872/68‑1 TTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCG > 1:654020/1‑68 TCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGA < 1:2162740/68‑1 TTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCT > 1:1582270/1‑68 CATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGT < 1:2302822/68‑1 CATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGT > 1:1475115/1‑68 CATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGT < 1:1454514/68‑1 CATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGT < 1:1297912/68‑1 CTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGA > 1:221715/1‑68 CTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGA > 1:593629/1‑68 CTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGA > 1:400932/1‑68 TATACTTGCCTGGGCAGTATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAA < 1:197768/68‑1 TATACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAA > 1:2825948/1‑68 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTA > 1:1630100/1‑68 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTA > 1:1375926/1‑68 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTA > 1:2190855/1‑68 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTA > 1:736922/1‑68 ACTTGCCTGGGCAATATTATCCCCTGCAACTAATGCGAAAAGTACCAGCGATCTGTTCAATGAAATTA > 1:1097954/1‑68 CTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTAT < 1:246251/68‑1 CTTGCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGGACCAGCGATCTGTTCAATGAAATTAT > 1:2825444/1‑68 GCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCC < 1:1688256/68‑1 GCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCC < 1:3139009/68‑1 GCCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCC < 1:1205995/68‑1 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCA > 1:139068/1‑68 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCA > 1:2146075/1‑68 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCA > 1:2763757/1‑68 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCA > 1:3222502/1‑68 CCTGGGCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCA > 1:2169512/1‑68 GCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGGTCTGTTCAATGAAATTATTCCATTGGG > 1:2809388/1‑68 GCAATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGG > 1:569321/1‑68 ATATTATCCCCTGCAACTAATGTGAAAGGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG < 1:2809466/68‑1 ATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG < 1:714696/68‑1 ATATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG < 1:2517093/68‑1 tagTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:1841826/65‑1 TATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:296994/68‑1 TATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:3174603/68‑1 TATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGC < 1:1450651/68‑1 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCT > 1:1458700/1‑68 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCT < 1:855845/68‑1 ATTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCT > 1:318670/1‑68 TTATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTT < 1:1943272/68‑1 TATCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTA > 1:1833440/1‑68 gCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAT < 1:2472557/67‑1 TCCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAT < 1:746451/68‑1 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCGATGAAATTATTCCATTGGGTCGCTTAATC > 1:3131404/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:3374664/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:579121/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:379525/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:574557/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC < 1:437508/68‑1 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:64709/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:3290770/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:3285932/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:2730769/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:2557906/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:685055/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:178641/1‑68 CCCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATC > 1:1615716/1‑68 CCCCTGCAACTAATGCGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTACTC > 1:1537123/1‑68 CCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGGAATTATTCCATTGGGTCGCTTAATCC < 1:2345957/68‑1 CCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCC < 1:3281618/68‑1 CCCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCC < 1:2371296/68‑1 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCc > 1:995641/1‑67 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCA > 1:354479/1‑68 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCA > 1:349807/1‑68 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCA > 1:2645381/1‑68 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCA > 1:741599/1‑68 CCTGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCA > 1:1450686/1‑68 CAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG < 1:1625393/68‑1 CAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATG < 1:1082043/68‑1 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTT > 1:3340945/1‑68 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTT > 1:2239931/1‑68 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTT > 1:2100737/1‑68 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTT > 1:1919811/1‑68 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTT > 1:957525/1‑68 CTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCAATATGGTT > 1:2441256/1‑68 AATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAA > 1:944727/1‑68 TGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGNTTAATC > 1:2159760/1‑68 AGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1619026‑1619099‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaactaatGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATC > NC_000913/1619120‑1619186 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |