| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,619,100 | Δ20 bp | intergenic (‑192/‑1) | marC ← / → marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1619100 | 1619119 | 20 | 83 [0] | [0] 82 | marC/marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1619099 | 0 (0.000) | 72 (2.000) | 30/116 | 0.0 | 100% | intergenic (‑191/‑21) | marC/marR | inner membrane protein MarC/DNA‑binding transcriptional repressor MarR |
| ? | NC_000913 | 1619120 = | 0 (0.000) | coding (1/435 nt) | marR | DNA‑binding transcriptional repressor MarR | |||||
ACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG > NC_000913/1619032‑1619166 | aCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAAT > 1:460678‑M1/1‑68 (MQ=255) cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATg < 1:1695032‑M1/68‑2 (MQ=255) gCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTATTgtgaa > 1:2899744‑M1/1‑63 (MQ=255) aTCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaa > 1:915939‑M1/1‑61 (MQ=255) tCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaag > 1:2302118‑M1/1‑60 (MQ=255) cGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagt < 1:2502872‑M1/68‑10 (MQ=255) ttcattcaTTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcg > 1:654020‑M1/1‑52 (MQ=255) tcattcatTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcga < 1:2162740‑M1/68‑18 (MQ=255) ttcattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatct > 1:1582270‑M1/1‑48 (MQ=255) cattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgt < 1:2302822‑M1/68‑23 (MQ=255) cattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgt > 1:1475115‑M1/1‑46 (MQ=255) cattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgt < 1:1454514‑M1/68‑23 (MQ=255) cattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgt < 1:1297912‑M1/68‑23 (MQ=255) cTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatga > 1:400932‑M1/1‑39 (MQ=255) cTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatga > 1:593629‑M1/1‑39 (MQ=255) cTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatga > 1:221715‑M1/1‑39 (MQ=255) tataCTTGCCTGGGCAGTATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaa < 1:197768‑M1/68‑32 (MQ=255) tataCTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaa > 1:2825948‑M1/1‑37 (MQ=255) aCTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaatta > 1:736922‑M1/1‑34 (MQ=255) aCTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaatta > 1:1630100‑M1/1‑34 (MQ=255) aCTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaatta > 1:1375926‑M1/1‑34 (MQ=255) aCTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaatta > 1:2190855‑M1/1‑34 (MQ=255) aCTTGCCTGGGCAATATTATCCCCTGCAACTAATgcgaaaagtaccagcgatctgttcaatgaaatta > 1:1097954‑M1/1‑34 (MQ=255) cTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattat < 1:246251‑M1/68‑36 (MQ=255) cTTGCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaaggaccagcgatctgttcaatgaaattat > 1:2825444‑M1/1‑33 (MQ=255) gCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcc < 1:3139009‑M1/68‑39 (MQ=255) gCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcc < 1:1205995‑M1/68‑39 (MQ=255) gCCTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcc < 1:1688256‑M1/68‑39 (MQ=255) ccTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcca > 1:2763757‑M1/1‑29 (MQ=255) ccTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcca > 1:2146075‑M1/1‑29 (MQ=255) ccTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcca > 1:139068‑M1/1‑29 (MQ=255) ccTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcca > 1:2169512‑M1/1‑29 (MQ=255) ccTGGGCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattcca > 1:3222502‑M1/1‑29 (MQ=255) gCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcggtctgttcaatgaaattattccattggg > 1:2809388‑M1/1‑24 (MQ=255) gCAATATTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattggg > 1:569321‑M1/1‑24 (MQ=255) atatTATCCCCTGCAACTAATgtgaaaggtaccagcgatctgttcaatgaaattattccattgggtcg < 1:2809466‑M1/68‑48 (MQ=255) atatTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcg < 1:714696‑M1/68‑48 (MQ=255) atatTATCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcg < 1:2517093‑M1/68‑48 (MQ=255) tattatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgc < 1:1450651‑M1/68‑49 (MQ=255) tattatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgc < 1:3174603‑M1/68‑49 (MQ=255) tattatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgc < 1:296994‑M1/68‑49 (MQ=255) tagtatcccCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgc < 1:1841826‑M1/65‑49 (MQ=255) attatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgct < 1:855845‑M1/68‑50 (MQ=255) attatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgct > 1:318670‑M1/1‑19 (MQ=255) attatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgct > 1:1458700‑M1/1‑19 (MQ=255) ttatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgctt < 1:1943272‑M1/68‑51 (MQ=255) tatCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgctta > 1:1833440‑M1/1‑17 (MQ=255) tCCCCTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaat < 1:746451‑M1/68‑54 (MQ=255) gcccctGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaat < 1:2472557‑M1/67‑54 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcgatgaaattattccattgggtcgcttaatc > 1:3131404‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:379525‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:3374664‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:2557906‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc < 1:437508‑M1/68‑55 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:574557‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:579121‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:64709‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:685055‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:3285932‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:178641‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:1615716‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:2730769‑M1/1‑14 (MQ=255) ccccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatc > 1:3290770‑M1/1‑14 (MQ=255) ccccTGCAACTAATgcgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttactc > 1:1537123‑M1/1‑14 (MQ=255) cccTGCAACTAATgtgaaaagtaccagcgatctgttcaatggaattattccattgggtcgcttaatcc < 1:2345957‑M1/68‑56 (MQ=255) cccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcc < 1:3281618‑M1/68‑56 (MQ=255) cccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcc < 1:2371296‑M1/68‑56 (MQ=255) ccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccc > 1:995641‑M1/1‑12 (MQ=255) ccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcca > 1:741599‑M1/1‑12 (MQ=255) ccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcca > 1:1450686‑M1/1‑12 (MQ=255) ccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcca > 1:2645381‑M1/1‑12 (MQ=255) ccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcca > 1:354479‑M1/1‑12 (MQ=255) ccTGCAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcca > 1:349807‑M1/1‑12 (MQ=255) cAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatg < 1:1082043‑M1/68‑61 (MQ=255) cAACTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatg < 1:1625393‑M1/68‑61 (MQ=255) cTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggtt > 1:957525‑M1/1‑5 (MQ=255) cTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggtt > 1:2239931‑M1/1‑5 (MQ=255) cTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggtt > 1:1919811‑M1/1‑5 (MQ=255) cTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggtt > 1:2100737‑M1/1‑5 (MQ=255) cTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggtt > 1:3340945‑M1/1‑5 (MQ=255) cTAATgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcaatatggtt > 1:2441256‑M1/1‑5 (MQ=255) aaTgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaa > 1:944727‑M1/1‑3 (MQ=255) tgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatgnttaatc > 1:2159760‑M1/1‑1 (MQ=255) | ACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCG > NC_000913/1619032‑1619166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |