| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,536,300 | IS1 (+) +9 bp | coding (277‑285/720 nt) | ompR ← | DNA‑binding transcriptional dual regulator OmpR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3536300 = | 0 (0.000) | 55 (1.340) | 29/132 | 0.1 | 100% | coding (285/720 nt) | ompR | DNA‑binding transcriptional dual regulator OmpR |
| ? | NC_000913 | = 3584195 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
| * | ? | NC_000913 | = 3536308 | 0 (0.000) | 41 (1.000) | 23/132 | 0.2 | 100% | coding (277/720 nt) | ompR | DNA‑binding transcriptional dual regulator OmpR |
| ? | NC_000913 | 3583428 = | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
GCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3536364‑3536300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGC < NC_000913/3584195‑3584129 GCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGT < 1:1195469/68‑1GCAACCCGATGCCGATCATTATGGAGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGT > 1:3114094/1‑68 CCGATGCCTATGAGTATGGTGACGGCGAGAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGA < 1:128386/68‑1 CCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGA < 1:999200/68‑1 CCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGA > 1:465285/1‑68 CCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGA > 1:3316611/1‑68 CCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGA < 1:2935390/68‑1 CCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGA < 1:2252829/68‑1 CCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGGAATGA > 1:1155387/1‑68 GATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACT < 1:1429428/68‑1 TCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTA < 1:2057420/68‑1 TCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTA > 1:513057/1‑68 ATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATT > 1:1042383/1‑68 ATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATT > 1:2086816/1‑68 ATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAAAGACTCCAAATTATT > 1:2224565/1‑68 GGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGATTCCAACTTATTGATAG > 1:379855/1‑68 GGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAG > 1:127280/1‑68 GGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAG > 1:2938549/1‑68 GGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAG > 1:2749458/1‑68 TGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTG < 1:550467/68‑1 TGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTG < 1:1244326/68‑1 TGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTG < 1:322497/68‑1 GACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGT > 1:2741680/1‑68 GACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGT < 1:2629257/68‑1 GCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTA > 1:58681/1‑68 CGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGTTAATGATTCCAAATTATTGATAGTGTTTTAT > 1:1524814/1‑68 GGAAGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGA < 1:2348934/68‑1 AGAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA > 1:3033371/1‑68 GAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT < 1:3047309/68‑1 GAAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT > 1:2360835/1‑68 AAGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATG < 1:2978725/68‑1 AGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGC > 1:956584/1‑68 AGTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGC > 1:3189113/1‑68 AGTGGACCGTATCGTAGGCCCGGGTAATGATTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGC > 1:3348706/1‑68 GTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC < 1:2513578/68‑1 GTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC > 1:740179/1‑68 GTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC < 1:427336/68‑1 GTGGACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC < 1:2435168/68‑1 ACCGTATCGTAGGCCTGGGTAATGATTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGAT > 1:1416606/1‑68 ACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATCGTGTTTTATGTTCAGATAATGCCCGAT > 1:2001376/1‑68 ACCGTATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGAT > 1:665347/1‑68 ACCGTATCGTAGGCCTGGGTAATGACTCCAACCTATTGATAGTGTTTTATGTTCAGATAATGCCCGAT > 1:431699/1‑68 ATCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTT > 1:93442/1‑68 TCGTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTT < 1:2044164/68‑1 GTAGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGT < 1:2563755/68‑1 AGGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCA > 1:1174591/1‑68 GGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT < 1:3279818/68‑1 GGCCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT < 1:395719/68‑1 CCTGGGTAATGACTCCAACTTATTGATCGTGTTTTATCTTCAGATAATGCCCGATGACTTTGTCATGC > 1:2389046/1‑68 CCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCTGATGACTTTGTCATGC > 1:614340/1‑68 CCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC > 1:1641801/1‑68 CCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC > 1:2081529/1‑68 CCTGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC > 1:1318387/1‑68 GGGTAATGACTCCGACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGC < 1:2223553/68‑1 GGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGC < 1:2444141/68‑1 GCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3536364‑3536300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGC < NC_000913/3584195‑3584129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |