| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1050545 | NA (NA) | 42 (1.070) | 24/126 | 0.1 | 67.7% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 1943189 | 20 (0.510) | coding (528/756 nt) | znuC | Zn(2(+)) ABC transporter ATP binding subunit | |||||
TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1050481‑1050545‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTGG < NC_000913/1943189‑1943126 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGCGTCATTACC > 1:163513/1‑65TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:2986226/1‑65TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:1478636/1‑65 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAT > 1:1457593/1‑65 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAA > 1:419034/1‑65 TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCC < 1:2679773/65‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAAT < 1:2467960/65‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAAT < 1:2099823/65‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCGTTACCCATTAAAACGCCACAATC > 1:1142303/1‑65 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATC > 1:2652463/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCAGAATCCAGTTCA > 1:1661049/1‑65 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCA > 1:1879947/1‑65 ATAAAACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCA < 1:960754/65‑1 ACACTATCAATAAGTTTGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGG < 1:195208/65‑1 ACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGG > 1:966195/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGG > 1:767200/1‑65 ACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGG < 1:1483166/65‑1 ACACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGG > 1:1405229/1‑65 CACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGT > 1:1420694/1‑65 CACTATCAATAAGTCGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGT < 1:2595278/65‑1 ACTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTC < 1:768689/65‑1 agATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCA < 1:941786/63‑1 CTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCA < 1:105351/65‑1 CTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCA < 1:2837056/65‑1 CTATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCA < 1:2491003/65‑1 ATCAATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAAT > 1:897437/1‑65 ATAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGG < 1:1013556/65‑1 ATAAGTTGGAGTCATTACCCATTAAAACGCCACAACCCAGTTCACGACGCAGTTGGTCAATAAGG > 1:2581445/1‑65 TAAGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGT < 1:217449/65‑1 AGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCA > 1:249479/1‑65 AGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCA > 1:90114/1‑65 AGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCA > 1:134557/1‑65 AGTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCA > 1:3052798/1‑65 GTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCAT < 1:1820404/65‑1 GTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCAT < 1:2011416/65‑1 GTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCAT < 1:1225203/65‑1 GTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCAT < 1:1114387/65‑1 GTTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCAT < 1:2146533/65‑1 TTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATA > 1:251980/1‑65 TTGGAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATA < 1:1285553/65‑1 GAGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAA < 1:2731957/65‑1 AGTCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAAC > 1:185529/1‑65 TCATTACCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGC > 1:2824291/1‑65 CCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTG > 1:255657/1‑65 CCCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTG > 1:2525165/1‑65 CCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTGG < 1:768729/65‑1 CCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTGG > 1:2387801/1‑65 CCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTGG < 1:1641425/65‑1 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1050481‑1050545‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCATTAAAACGCCACAATCCAGTTCACGACGCAGTTGGTCAATAAGGTCATATAACGCCACCTGG < NC_000913/1943189‑1943126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |