| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,939,258 | IS5 (+) +4 bp | coding (933‑936/972 nt) | lpxM ← | myristoyl‑acyl carrier protein‑dependent acyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1939258 = | 2 (0.050) | 43 (1.080) | 18/128 | 0.4 | 95.3% | coding (936/972 nt) | lpxM | myristoyl‑acyl carrier protein‑dependent acyltransferase |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1939261 | 2 (0.050) | 53 (1.330) | 25/128 | 0.1 | 96.1% | coding (933/972 nt) | lpxM | myristoyl‑acyl carrier protein‑dependent acyltransferase |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
AGAACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1939315‑1939258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > NC_000913/2101749‑2101812 gGAACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGT < 1:1567190/64‑1 AACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGC > 1:118750/1‑65 ACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCG > 1:488464/1‑65 ACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCG > 1:2333332/1‑65 ACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCG > 1:2168856/1‑65 ACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCG > 1:1750625/1‑65 ATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAAT > 1:51320/1‑65 ACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:1298302/1‑65 ACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:2475424/1‑65 ACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:3176157/1‑65 ACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:206233/1‑65 ACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:3008315/1‑65 ACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:2562608/1‑65 ACACCTGGATACTAAAATTGCCGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAA > 1:2858276/1‑65 ACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGC > 1:904729/1‑65 ACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGC > 1:2351921/1‑65 CCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCG > 1:144509/1‑65 CCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCG > 1:1974225/1‑65 CCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGAGCGAATAAGCG > 1:606227/1‑65 TGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGG > 1:1119495/1‑65 TGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGG > 1:2318510/1‑65 TGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGG > 1:1753016/1‑65 ATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAA > 1:1151564/1‑65 ATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAA > 1:2519220/1‑65 ACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAAT > 1:607194/1‑65 ACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAAT > 1:482329/1‑65 ACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAAT > 1:2981026/1‑65 AAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCT < 1:2207074/65‑1 AAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAAGTGCGAATAAGCGGGGAAATTCT < 1:618455/65‑1 TGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG < 1:959952/65‑1 TGCTGAAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG > 1:2329983/1‑65 AAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA < 1:3146572/65‑1 AAAACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGA < 1:3248401/65‑1 ACTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTC > 1:1312318/1‑65 CTCGCAAACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCA > 1:2508225/1‑65 ACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTT > 1:1807689/1‑65 ACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTT > 1:2927024/1‑65 ACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTT > 1:659370/1‑65 ACCGGGCGAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTT > 1:2516810/1‑65 GAAATCCAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT < 1:608736/65‑1 TCCAGGGAAGGTGCGAATCAGCGGGGAAATTCTTCTCGGCTGACTCAGTCCTTTAATTTCTTCct > 1:1395843/1‑63 GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCGTTCCATTTCTTCATGTTT > 1:1751400/1‑65 GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > 1:1280323/1‑65 AGAACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1939315‑1939258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > NC_000913/2101749‑2101812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |