| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,939,258 | IS5 (+) +4 bp | coding (933‑936/972 nt) | lpxM ← | myristoyl‑acyl carrier protein‑dependent acyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1939258 = | 2 (0.050) | 43 (1.080) | 18/128 | 0.4 | 95.3% | coding (936/972 nt) | lpxM | myristoyl‑acyl carrier protein‑dependent acyltransferase |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1939261 | 2 (0.050) | 53 (1.330) | 25/128 | 0.1 | 96.1% | coding (933/972 nt) | lpxM | myristoyl‑acyl carrier protein‑dependent acyltransferase |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1939198‑1939261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG < NC_000913/2102943‑2102882 GGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGG < 1:183961/65‑1 GCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGG > 1:3111094/1‑65 CTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGG < 1:3153004/65‑1 TCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGT < 1:1972828/65‑1 TCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGT < 1:2857106/65‑1 TCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGT < 1:1490371/65‑1 TCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGT < 1:3014513/65‑1 TCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGT < 1:168308/65‑1 CCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTG > 1:1939658/1‑65 CTCGCGAGAGGCTTTTGTATTTGATGGGATAAAGATCTGTGCGCTTATACGGCTGGGGAAGGTGC < 1:682047/65‑1 GCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAA < 1:2765815/65‑1 CGAGAGGCTTTTTTATTTGATGGGATGAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAAC > 1:435148/1‑65 CGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACAGCTGGGGCAGGTGCGAcc > 1:976701/1‑63 AGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGGGCGCACAA > 1:1299689/1‑65 GAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAG < 1:1126172/65‑1 atGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGT < 1:3043155/63‑1 CTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCC < 1:611880/65‑1 CTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCC < 1:1437555/65‑1 CTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGACCC > 1:1114911/1‑65 TTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGCAGGCGCGAACAAGTCCCTGAT > 1:544223/1‑65 aTTGAGGGAATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:2620019/64‑1 TTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:336266/65‑1 TTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:1009764/65‑1 TTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:1823717/65‑1 TTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:41206/65‑1 TTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:772946/65‑1 TTGATGGGATAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:1702912/65‑1 tagAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT < 1:158984/62‑1 TAAAGATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT < 1:1720047/65‑1 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGGACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:3173526/1‑65 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:2994249/1‑65 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:394001/1‑65 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:3171302/1‑65 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:2553725/1‑65 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:2456893/1‑65 GATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:727428/1‑65 ATCTTTGCGCTTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAT > 1:1989542/1‑65 TTTGCGCTTATACGGCTGGGGAAGGGGCGAAAAAGTCCCTGATATGAGATCATGTTTGTCATCTG > 1:2727094/1‑65 TTATACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT < 1:408543/65‑1 TACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:423401/65‑1 TACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:1647720/65‑1 TACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:241721/65‑1 ACGGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA > 1:1095635/1‑65 GGCTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACA > 1:2434100/1‑65 agGGGGAAGGTGCGAACAAGTCCCGGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:173153/63‑1 CTGGGGGAGGTGCGAACAAGTCCCTGATATGAGGTCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:431488/65‑1 CTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:3102631/65‑1 CTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:1800645/65‑1 CTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:2894296/65‑1 CTGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:1561689/65‑1 TGGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG < 1:2141561/65‑1 TGGGAAAGGTGCGAACAAGTCCCTGATATGAGATGATGTTTGTCATCTGGAGCCATAGAACAGGG < 1:819950/65‑1 TGGGAAAGGTGCGAACAAGTCCCTGATATGACATCATGTTTGTCATCTGGAGCCATAGAACAGGG < 1:1422724/65‑1 GGCCTCTCCTCGCGAGAGGCTTTTTTATTTGATGGGATAAAGATCTTTGCGCTTATACGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1939198‑1939261‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG < NC_000913/2102943‑2102882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |