| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1943181 = | 17 (0.430) | 37 (0.950) | 16/126 | 0.5 | 68.5% | coding (520/756 nt) | znuC | Zn(2(+)) ABC transporter ATP binding subunit |
| ? | NC_000913 | = 1979270 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
TCAGGCACAGCACTTCATCGGTTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1943244‑1943181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG < NC_000913/1979270‑1979206 TCAGGCACAGCACTTCATCGGTTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACG < 1:1049608/65‑1 ACAGCACTTCATCGGTTTTTGCCATCACCAGCTGGAGATCGTGAGAAACCATTAACACGGTGATG > 1:668455/1‑65 ACAGCACTTCATCGGTTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATG > 1:1632626/1‑65 ACTTCATCGGTTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCC < 1:364695/65‑1 TTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGA < 1:2969858/65‑1 TTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGA < 1:2316808/65‑1 TTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGA < 1:1562369/65‑1 TTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGA < 1:2025032/65‑1 GCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAG < 1:1228927/65‑1 GCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAG < 1:678083/65‑1 GCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAG < 1:1983672/65‑1 CCATCACCGGATGCAGATCGTGAGAAACCAGTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:384860/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:1798720/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:2408748/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:2327684/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:1464045/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:1457181/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:941970/65‑1 CCATCACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGT < 1:1058250/65‑1 CACCAGATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTAT < 1:94743/65‑1 ATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT < 1:2230568/65‑1 ATGCAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT < 1:2720077/65‑1 CAGATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT > 1:2646184/1‑65 ATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT > 1:395429/1‑65 ATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT > 1:2044514/1‑65 ATCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTT > 1:3241330/1‑65 TCGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG > 1:745304/1‑65 CGTGAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA > 1:2574801/1‑65 GAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT < 1:883821/65‑1 GAGAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT < 1:2738428/65‑1 GAAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTGTGAGGTGC < 1:397902/65‑1 AAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT < 1:3191995/65‑1 AAACCATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT < 1:2642759/65‑1 agTTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 1:1962770/63‑1 CATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 1:1726694/65‑1 CATTAAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 1:2668498/65‑1 ttAAACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG < 1:3125905/63‑1 ACGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTt > 1:1258255/1‑64 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTttt > 1:238280/1‑62 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:2664609/1‑65 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:617872/1‑65 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:66303/1‑65 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:3194437/1‑65 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:3126803/1‑65 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:2365719/1‑65 GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG > 1:1347801/1‑65 TCAGGCACAGCACTTCATCGGTTTTTGCCATCACCAGATGCAGATCGTGAGAAACCATTAAAACg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1943244‑1943181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG < NC_000913/1979270‑1979206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |