| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 485,977 | IS5 (–) +4 bp | coding (217‑220/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 273955 = | NA (NA) | 67 (1.120) | 25/128 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 485980 | 0 (0.000) | coding (220/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | 485977 = | 0 (0.000) | 81 (1.360) | 36/128 | 0.1 | 100% | coding (217/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR |
| ? | NC_000913 | = 575785 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/274017‑273955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTTGT < NC_000913/485980‑485921 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:3376816/65‑1AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCT < 1:3122179/65‑1 ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA < 1:997900/65‑1 ACATGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTA < 1:1723019/65‑1 TGANGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTT < 1:3039717/65‑1 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCAC > 1:2246880/1‑65 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCAC > 1:2040710/1‑65 AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCAC > 1:4766690/1‑65 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACC < 1:3326187/65‑1 GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACC < 1:4023541/65‑1 AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCA > 1:3259693/1‑65 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAAT < 1:467309/65‑1 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAAT < 1:324514/65‑1 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAAT < 1:855147/65‑1 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAAT < 1:1750403/65‑1 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAAT < 1:2951005/65‑1 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAAT > 1:2881182/1‑65 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGct > 1:89299/1‑63 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGA < 1:2298410/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGA < 1:2437413/65‑1 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGA > 1:3793551/1‑65 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATT < 1:3619118/65‑1 ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATT > 1:1613662/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:2026220/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:3033074/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:3709126/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:3847046/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:4047554/1‑65 TCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:533837/1‑65 TCAGCCGAGAAGAAGTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACA > 1:3679214/1‑65 AGCCGAGAAGAATTTCCGCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:1611588/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:4108208/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:600441/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:3601972/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:4324826/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:4342420/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:1369438/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:2171496/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:2723747/65‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGT < 1:249040/65‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC < 1:1935258/65‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC > 1:1936720/1‑65 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC < 1:1199057/65‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC < 1:3635021/65‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC < 1:4027320/65‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC < 1:2639497/65‑1 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTC > 1:1859938/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGAT > 1:3215899/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGAT > 1:4799921/1‑65 AGAATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGAT > 1:2908440/1‑65 ATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTC < 1:3075038/65‑1 ATTTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTC < 1:4777147/65‑1 TTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCAC > 1:1878640/1‑65 TTCCCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCAC > 1:98179/1‑65 CCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGA < 1:226377/65‑1 CCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGA > 1:4365680/1‑65 CCCGCTTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGA < 1:3552222/65‑1 TTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAA < 1:397676/65‑1 TTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAA < 1:1417335/65‑1 TTATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAA < 1:2203268/65‑1 ATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATC < 1:3136277/65‑1 ATTCGCACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATC < 1:3072510/65‑1 ACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTT > 1:231122/1‑65 ACCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTT > 1:3656281/1‑65 CCTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTTG < 1:2542332/65‑1 CTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTTGT > 1:3892143/1‑65 CTTCCCTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTTGT < 1:1413105/65‑1 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/274017‑273955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTTCACCAATATTGGATTCTGACAGTTCCCAGATCTCACTGAACAAATCCGACTTGT < NC_000913/485980‑485921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |