| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 485,977 | IS5 (–) +4 bp | coding (217‑220/648 nt) | acrR → | DNA‑binding transcriptional repressor AcrR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 273955 = | NA (NA) | 67 (1.120) | 25/128 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 485980 | 0 (0.000) | coding (220/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR | |||||
| * | ? | NC_000913 | 485977 = | 0 (0.000) | 81 (1.360) | 36/128 | 0.1 | 100% | coding (217/648 nt) | acrR | DNA‑binding transcriptional repressor AcrR |
| ? | NC_000913 | = 575785 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
TAATATCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/486039‑485977‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTT < NC_000913/575785‑575722 TAATATCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGGTCTAGGG > 1:4059986/1‑65 TATCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGGAG > 1:1763311/1‑65 ATCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGG > 1:2768121/1‑65 cagCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT < 1:888866/62‑1 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCGTGATACTCAAGCTCTAGGGAAGGg > 1:3957706/1‑64 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT < 1:1182550/65‑1 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT < 1:289247/65‑1 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT < 1:2285429/65‑1 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT < 1:2180372/65‑1 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT < 1:4580196/65‑1 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT > 1:4596869/1‑65 TCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGT > 1:1740325/1‑65 TCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGC < 1:4684152/65‑1 TCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGA < 1:3808004/65‑1 TCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGA < 1:3881146/65‑1 TCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGA > 1:1659131/1‑65 TCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGA < 1:576540/65‑1 TCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGGGCGA > 1:4158649/1‑65 ATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAG < 1:4035654/65‑1 TACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCATGCTCTAGGGAAGGTGCGAAAAAGT > 1:3940411/1‑65 TACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGGACAAGT > 1:2453391/1‑65 TACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGT > 1:4732877/1‑65 TACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGT > 1:1696027/1‑65 TACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGT > 1:2361574/1‑65 TACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGAGAAGGTGCGAACAAGT > 1:4171906/1‑65 ACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTC > 1:1160890/1‑65 ACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCGAGGGAAGGTGCGAACAAGTC < 1:2717096/65‑1 tggGAGTGGATCGCCGTGGGATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGCCCC < 1:1301694/62‑1 TGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCC < 1:2364264/65‑1 TGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCC < 1:207142/65‑1 AGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACGAGTCCCTGAT < 1:4407803/65‑1 AGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGAT < 1:3842361/65‑1 GTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATA > 1:1043516/1‑65 GTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGGGCGAAAAAGTCCCTGATA > 1:2080420/1‑65 GATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:4357936/65‑1 GATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:1230010/65‑1 GATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:611218/65‑1 GATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:4057390/65‑1 GATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGA < 1:3532912/65‑1 GATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGGGCGAACAAGTCCCTGATATGA > 1:4397185/1‑65 ATCGCCAGGGAATTTTGCCTGATGCTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:522426/65‑1 ATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAG < 1:4789286/65‑1 TCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGA < 1:3575768/65‑1 GCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:1043796/1‑65 GCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:3471207/1‑65 GCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:2331800/1‑65 GCCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:2368992/1‑65 CCAGGGAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGACCCTGATATGAGATCA > 1:4198932/1‑65 GAATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT > 1:4624082/1‑65 ATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT > 1:3647379/1‑65 ATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT > 1:1308085/1‑65 ATTTTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT < 1:1735557/65‑1 TTGCCTGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCAT < 1:3851743/65‑1 TGATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGA < 1:4020052/65‑1 ATACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGC < 1:4361247/65‑1 TACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC < 1:259725/65‑1 TACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC < 1:4336282/65‑1 TACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC < 1:2116657/65‑1 TACTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC < 1:257688/65‑1 ctaAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT < 1:3009455/62‑1 CTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT < 1:957056/65‑1 CTCAAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT < 1:2680626/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:1599457/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:639242/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:1210762/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:557393/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:514447/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:424195/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:2075146/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:4419086/65‑1 AAGCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGA < 1:2971461/65‑1 GCTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAC > 1:523957/1‑65 CTCTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACc > 1:1648100/1‑64 CTAGGGAAGGTGCGAAGAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 1:4200862/65‑1 TAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG < 1:4343739/65‑1 TAGGGAAGGGGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG < 1:1320188/65‑1 AGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT < 1:2739928/65‑1 AGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT < 1:1030766/65‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTT < 1:4761198/65‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTT < 1:460342/65‑1 GGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTT < 1:3442403/65‑1 TAATATCTCTCTTAATACTGAGAGTGGATCGCCAGGGAATTTTGCCTGATACTCAAGCTCTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/486039‑485977‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTT < NC_000913/575785‑575722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |