| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 458,790 | IS186 (+) +6 bp :: Δ1 bp | intergenic (+90/‑93) | clpX → / → lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 15387 = | NA (NA) | 62 (1.110) | 30/120 | 0.1 | 100% | noncoding (1/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 458795 | 0 (0.000) | intergenic (+95/‑93) | clpX/lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease | |||||
| * | ? | NC_000913 | 458790 = | 0 (0.000) | 61 (1.070) | 27/122 | 0.2 | 100% | intergenic (+90/‑98) | clpX/lon | ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease |
| ? | NC_000913 | = 609350 | NA (NA) | noncoding (1344/1345 nt) | IS186 | repeat region | |||||
Only 100 of 132 total aligned reads displayed.
AAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACC > NC_000913/458731‑458858 | cgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACa < 1:10215‑M1/6‑1 (MQ=255)aaaGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACa < 1:264667/65‑1 (MQ=255) aggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATc > 1:72621‑M1/58‑65 (MQ=255) aggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATc > 1:3084130‑M1/58‑65 (MQ=255) aGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtc > 1:533029‑M2/1‑63 (MQ=255) aGGGGCGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtc > 1:4529454‑M2/1‑63 (MQ=255) ggggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcc > 1:1989687‑M2/1‑62 (MQ=255) gcgccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATccc > 1:3697557‑M1/56‑65 (MQ=255) gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATccc > 1:4280701‑M1/56‑65 (MQ=255) gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATccc > 1:384537‑M1/56‑65 (MQ=255) gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATccc > 1:2178096‑M1/56‑65 (MQ=255) gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATccc > 1:1605477‑M1/56‑65 (MQ=255) aggccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATccc > 1:1377282‑M1/56‑65 (MQ=255) ggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtccca > 1:3731050‑M2/1‑60 (MQ=255) gaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCatat < 1:2936672‑M1/15‑1 (MQ=255) gaggcgtcgcattcttcagatggtgcaacccttaagttagcgcttatgggGAAACATCCCCatat > 1:4024430‑M1/51‑65 (MQ=255) ttttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagc > 1:2469812‑M2/1‑55 (MQ=255) ggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATAc < 1:4455638‑M1/17‑1 (MQ=255) ggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATAc < 1:1847761‑M1/17‑1 (MQ=255) gtcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGa > 1:1003497‑M1/46‑65 (MQ=255) tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaa > 1:1104910‑M2/1‑50 (MQ=255) tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaa > 1:3486483‑M2/1‑50 (MQ=255) tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaa > 1:3843495‑M2/1‑50 (MQ=255) tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaa > 1:1806942‑M2/1‑50 (MQ=255) tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaa < 1:1269770‑M2/65‑16 (MQ=255) tcgcattcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGAc > 1:1123907‑M1/45‑65 (MQ=255) ctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaac > 1:1820059‑M2/1‑49 (MQ=255) ctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaac > 1:4265915‑M2/1‑49 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact > 1:483010‑M2/1‑48 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact > 1:397340‑M2/1‑48 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact > 1:4034569‑M2/1‑48 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact > 1:2938933‑M2/1‑48 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact > 1:404917‑M2/1‑48 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact > 1:874521‑M2/1‑48 (MQ=255) tcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaact < 1:839040‑M2/65‑18 (MQ=255) tcCCCTTTAATGTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAGCAtcccataagcgctaact > 1:3636325‑M2/1‑48 (MQ=255) tcttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACAt < 1:857934‑M1/27‑1 (MQ=255) tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagg > 1:2524875‑M2/1‑43 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:4778980‑M1/38‑65 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:4698570‑M1/38‑65 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:4658264‑M1/38‑65 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:2900648‑M1/38‑65 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:3632974‑M1/38‑65 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:1136737‑M1/38‑65 (MQ=255) cttcagatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATg > 1:3730585‑M1/38‑65 (MQ=255) tcanatggttcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGtt > 1:3039965‑M1/36‑65 (MQ=255) tAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggt > 1:2990387‑M2/1‑41 (MQ=255) tttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgt > 1:2254379‑M2/1‑38 (MQ=255) tttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgt > 1:4094536‑M2/1‑38 (MQ=255) tCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggta > 1:2570997‑M2/1‑34 (MQ=255) tCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggta > 1:2807807‑M2/1‑34 (MQ=255) tCCTCTATTCTCGGCGTGGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggta > 1:1838816‑M2/1‑34 (MQ=255) ccTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtat < 1:3084029‑M2/65‑33 (MQ=255) tctATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtatta < 1:3836313‑M2/65‑35 (MQ=255) acccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGt < 1:1231017‑M1/42‑1 (MQ=255) acccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGt > 1:1070495‑M1/24‑65 (MQ=255) ccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGa < 1:1539568‑M1/44‑1 (MQ=255) ccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGa < 1:1970006‑M1/44‑1 (MQ=255) ccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGa < 1:3544424‑M1/44‑1 (MQ=255) tctcGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcct < 1:3988142‑M2/65‑40 (MQ=255) cttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa > 1:2010005‑M1/21‑65 (MQ=255) ctcGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctg > 1:234011‑M2/1‑25 (MQ=255) taagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc > 1:2648931‑M1/19‑65 (MQ=255) taagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc > 1:4574728‑M1/19‑65 (MQ=255) taagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc > 1:1572624‑M1/19‑65 (MQ=255) agttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac < 1:3532336‑M1/49‑1 (MQ=255) agttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac < 1:689460‑M1/49‑1 (MQ=255) agttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGcac < 1:4196668‑M1/49‑1 (MQ=255) gCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatat < 1:2140298‑M2/65‑45 (MQ=255) gCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatat < 1:429059‑M2/65‑45 (MQ=255) tagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGt > 1:4780212‑M1/14‑65 (MQ=255) tagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGt > 1:2096109‑M1/14‑65 (MQ=255) ggtgaATGGGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatga > 1:2907356‑M2/3‑19 (MQ=255) gTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatga > 1:71420‑M2/1‑19 (MQ=255) gcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCg > 1:3930198‑M1/12‑65 (MQ=255) cagcttatgggGAAACATCGCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCg > 1:1927537‑M1/12‑65 (MQ=255) gcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtg < 1:747364‑M1/56‑1 (MQ=255) gcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtg < 1:680565‑M1/56‑1 (MQ=255) gcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCgtg < 1:501194‑M1/56‑1 (MQ=255) gcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGCCgtg < 1:1154089‑M1/56‑1 (MQ=255) aTGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaa < 1:3411909‑M2/65‑52 (MQ=255) aTGTGGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaa < 1:3567556‑M2/65‑52 (MQ=255) tatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCa > 1:2209620‑M1/7‑65 (MQ=255) gtgGGGGAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacg < 1:4143379‑M2/65‑54 (MQ=255) tgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATc > 1:2762329‑M1/5‑65 (MQ=255) ggggAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgc < 1:3356643‑M2/65‑57 (MQ=255) ggggAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgc > 1:2639151‑M2/1‑9 (MQ=255) gggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCt > 1:3365659‑M1/4‑65 (MQ=255) gggAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgcc < 1:654870‑M2/65‑58 (MQ=255) ggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTg > 1:2312601‑M1/3‑65 (MQ=255) ggAAACAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccg < 1:1384845‑M2/65‑59 (MQ=255) gGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa < 1:494911‑M1/64‑1 (MQ=255) gGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa < 1:3527470‑M1/64‑1 (MQ=255) aCAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatga > 1:4751311‑M2/1‑3 (MQ=255) aCAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatga < 1:2231306‑M2/65‑63 (MQ=255) aCAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatga < 1:1239082‑M2/65‑63 (MQ=255) aCAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatga > 1:1013058‑M2/1‑3 (MQ=255) aCAgcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatga > 1:3322490‑M2/1‑3 (MQ=255) cAtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaa < 1:433650‑M2/65‑64 (MQ=255) cATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAcc < 1:3067555/65‑1 (MQ=255) | AAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACC > NC_000913/458731‑458858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |